Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01941 ATGAACAAAAGGGTCATCACAGAGCTTCTTCTGGGTCTCGACCATGCCACTCAGCTCAAGTTTCTGCTTCAGAACCCTGTTGGCCCAGATGGGTCTGTTGCAGCTAAGGAACTAGTCACCAATGTGCAGAGATCTTTCGCTCAAACTCTTTCTATGTTGACTTCTTCTCAGCCTGCAAGGGGTGAAGACGAGGTTGCTCAGAATCTCCTGATTTCTGGGGAAGATGCGTCGCAGGTTGCAAGCATTGATCCCAGGTCTGAGGATTCAACTGAGAGTAGAAAGAGATCGTTGCCCCTCGCAAAGGATCGCAGAGGTTCCTACAAACGAAGGAAGACGGAACAGACATGGACCATAGTTTCCCACACTATTGATGATAATCGTGCGTGGAGAAAGTACGGACAAAAGGATATTCTAAATTCTCAGTTTCCTAGGAGTTACTTCAGATGCACCAGGAAGTATGAACAAGGTTGCAAAGCCACAAAACAAGTGCAACGGTTAGAAGAGAATCCTGATATGTACAATATTACGTACATTGGGTTTCACACATGCAAAGACAGCCTCAAGGCTCCACAAATGGTGACATGTTCTGAAACCTGGGACTCATTTCTTGAGAATTCCCATGAAGACTTGAATGTTCCAAATGAAGAACAGCAACATGAATGTCCTCCGATGAGGTCACAAAGCCCAATTGTTAAACAAGAATGTCTCAATGATGAGACTGACCCCAGTGATCTTACAGATGCCAACCTGTGGTCTGATTTGAAGGATTTTGAACTGTCCAATGACAAGCCTGCGTTGAAAATATCAGATGCATTCATGAACTTGCTCTCGGAGTTTGGACATGAATTTTGA 852 0.446 MNKRVITELLLGLDHATQLKFLLQNPVGPDGSVAAKELVTNVQRSFAQTLSMLTSSQPARGEDEVAQNLLISGEDASQVASIDPRSEDSTESRKRSLPLAKDRRGSYKRRKTEQTWTIVSHTIDDNRAWRKYGQKDILNSQFPRSYFRCTRKYEQGCKATKQVQRLEENPDMYNITYIGFHTCKDSLKAPQMVTCSETWDSFLENSHEDLNVPNEEQQHECPPMRSQSPIVKQECLNDETDPSDLTDANLWSDLKDFELSNDKPALKISDAFMNLLSEFGHEF 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01941 283 ProSiteProfiles WRKY domain profile. 123 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01941 283 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01941 283 SUPERFAMILY WRKY DNA-binding domain 120 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01941 283 MobiDBLite consensus disorder prediction 86 111 - -
Viun9g01941 283 Gene3D WRKY domain 109 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01941 283 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 34 211 IPR044810 GO:0003700
Viun9g01941 283 MobiDBLite consensus disorder prediction 76 111 - -
Viun9g01941 283 Pfam WRKY DNA -binding domain 124 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01941 Viun-Chr9 29320007 29322712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01941 4 214 WRKY Transcription Factor Family AT3G56400 43.662 2.51e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g01941 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01941 - - vun:114164744 577.4