Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01940 ATGGAAGAGGTAATTAACTCCATTCGACGCGCTTCTGAATTGGTTCAAAAGCTTGAACAAGACCTACCCAACTTGGCGAACCAACCAGGGACGCTGTCCCTGTCCATTGATCAGATAACTGAGGCTTTCACAGCTGCCAAGGAAAAGCTGTTGCTGATTTCCCGACACACCCAAACCTCGGAATCTCCTCCAATGTTGCTTCATGAAACGACACCCCAGCAGCCTCAGATGGATGCTACTCTAATGCAGGAGTGGTTAAGGTCTAGTCATGCACTAACCATTGATCAGTTGTTTCAAATGCAACGTGCTGCTGCAATGGGAGGGAGAGAGGTCGAAGATTCAGAGAGAACCATTGGATCTGAAGGAGATCAAGCCCAAGGAATCCACGCATCTTCTTCACGACCACGAAGAAGCAGGGAAGCAAATCAAGAGAAGAAGAAAATTCTGGTTCCTGCCCCACAGTTTGGGAACACAGAGATGCCACCGGAGGATGGTTTCACTTGGAGGAAATATGGGCAGAAAGAAATACTTGGATCCAAATACCCGAGGAGTTACTACAGATGCACACATCAGAAGTTATATGAATGCCAAGCCAAGAAGATGGTGCAAAGACTTGATCATAATGCTGACATATTTGAGGTAACATACAGAGGGAAACACACATGCCACATGTCCTCCACAGCACCATCGTCGGTTCCTCCAGAACATATTTTGGTGGACATGACACAAAATAGTAACGCCATTTCCTCTCAGTTGTCTCCGTCAGTGAATCTCAGCCTCCATCCCGCTAGTGCCGGCGCCGCCACCACTAGTGGCAGGGGCGGTGCCTCCGCCTCAAGATACGGTGGTGATTATCCCGTGGTGGATATGGCTGATGCTATGTTCAACTCTGGTAGCAGCAGCGGCAACAACAGCATGGAATTTCTCTTCTCTCCCACCGAAGATAAAACTGATGCAAATTGA 963 0.4829 MEEVINSIRRASELVQKLEQDLPNLANQPGTLSLSIDQITEAFTAAKEKLLLISRHTQTSESPPMLLHETTPQQPQMDATLMQEWLRSSHALTIDQLFQMQRAAAMGGREVEDSERTIGSEGDQAQGIHASSSRPRRSREANQEKKKILVPAPQFGNTEMPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKMVQRLDHNADIFEVTYRGKHTCHMSSTAPSSVPPEHILVDMTQNSNAISSQLSPSVNLSLHPASAGAATTSGRGGASASRYGGDYPVVDMADAMFNSGSSSGNNSMEFLFSPTEDKTDAN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01940 320 SMART WRKY_cls 162 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01940 320 ProSiteProfiles WRKY domain profile. 163 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01940 320 SUPERFAMILY WRKY DNA-binding domain 159 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01940 320 Pfam WRKY DNA -binding domain 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01940 320 Coils Coil 1 28 - -
Viun9g01940 320 MobiDBLite consensus disorder prediction 105 145 - -
Viun9g01940 320 Gene3D WRKY domain 152 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01940 320 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 46 247 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01940 Viun-Chr9 29314001 29316661 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01940 1 315 WRKY Transcription Factor Family AT2G40740 38.700 1.36e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g01940 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01940 - - pvu:PHAVU_009G043200g 530.791