Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01938 ATGGAAGAGGTAATTAACTCCATTCGACGCGCTTCTGAATTGGTTCAAAAGCTTGAACAAGACCTACCCAACTTGGCGAACCAACCAGGGACGCTGTCCCTGTCCATTGATCAGATAACTGAGGCTTTCACAGCTGCCAAGGAAAAGCTGTTGCTGATTTCCCGACACACCCAAACCTCGGAATCTCCTCCAATGTTGCTTCATGAAACGACACCCCAGCAGCCTCAGATGGATGCTACTCTAATGCAGGAGTGGTTAAGGTCTAGTCATGCACTAACCATTGATCAGTTGTTTCAAATGCAACGTGCTGCTGCAATGGGAGGGAGAGAGGTCGAAGATTCAGAGAGAACCATTGGATCTGAAGGAGATCAAGCCCAAGGAATCCACGCATCTTCTTCACGACCACGAAGAAGGGAAGCAAATCAAGAGAAGAAGAAAATTCTGGTTCCTGCCCCACAGTTTGGGAACACAGAGATGCCACCGGAGGATGGTTTCACTTGGAGGAAATATGGGCAGAAAGAAATACTTGGATCCAAATACCCGAGGAGTTACTACAGATGCACACATCAGAAGTTATATGAATGCCAAGCCAAGAAGATGGTGCAAAGACTTGATCATAATGCTGACATATTTGAGGTAACATACAGAGGGAAACACACATGCCACATGTCCTCCACAGCACCATCGTCGGTTCCTCCAGAACATATTTTGGTGGACATGACACAAAATAGTAACGCCATTTCCTCTCAGTTGTCTCCGTCAGTGAATCTCAGCCTCCATCCCGCTAGTGCCGGCGCCGCCACCACTAGTGGCAGGGGCGGTGCCTCCGCCTCAAGATACGGTGGTGATTATCCCGTGGTGGATATGGCTGATGCTATGTTCAACTCTGGTAGCAGCAGCGGCAACAACAGCATGGAATTTCTCTTCTCTCCCACCGAAGATAAAACTGATGCAAATTGA 960 0.4823 MEEVINSIRRASELVQKLEQDLPNLANQPGTLSLSIDQITEAFTAAKEKLLLISRHTQTSESPPMLLHETTPQQPQMDATLMQEWLRSSHALTIDQLFQMQRAAAMGGREVEDSERTIGSEGDQAQGIHASSSRPRRREANQEKKKILVPAPQFGNTEMPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKMVQRLDHNADIFEVTYRGKHTCHMSSTAPSSVPPEHILVDMTQNSNAISSQLSPSVNLSLHPASAGAATTSGRGGASASRYGGDYPVVDMADAMFNSGSSSGNNSMEFLFSPTEDKTDAN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01938 319 Gene3D WRKY domain 151 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01938 319 Pfam WRKY DNA -binding domain 162 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01938 319 MobiDBLite consensus disorder prediction 106 145 - -
Viun9g01938 319 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 46 246 IPR044810 GO:0003700
Viun9g01938 319 SUPERFAMILY WRKY DNA-binding domain 158 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01938 319 Coils Coil 1 28 - -
Viun9g01938 319 ProSiteProfiles WRKY domain profile. 162 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01938 319 SMART WRKY_cls 161 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01938 Viun-Chr9 29313999 29316661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01938 1 314 WRKY Transcription Factor Family AT2G40740 39.130 2.21e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g01938 WRKY 1.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01938 - - pvu:PHAVU_009G043200g 533.487