Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01937 ATGGCTGCACCTTCTTCTTCAAATTGGGTCATGGAAACCGCTCATGATGTTCCTCATGTTCTGGCCGTCGACGACAACCTCATTGATCGAAAACTCGTTGAGAAACTCCTCAGGAATTCTTCTTGCAAAGTTACAACTGCAGAAAATGGACCAAGGGCATTGGAGTTATTGGGCTTGACAAGTGGTGGACAGAACAGCATGAACGGTAGATCCAAAGTAAATTTGGTAATCACAGACTATTGCATGCCAGGAATGACAGGCTATGAGCTACTCAAGAAAATTAAGGAATCATCTGTAATGAAGGAAGTCCCTGTAGTGATAATGTCTTCTGAGAACATACCCACACGGATTAACAAGTGTCTGGAAGAAGGAGCTCAGATGTTCATCTTAAAGCCCCTCAAACAATCTGATGTAAAGAAACTGACATGTCAGTTAATGAATTGA 444 0.4212 MAAPSSSNWVMETAHDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNSMNGRSKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCLEEGAQMFILKPLKQSDVKKLTCQLMN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01937 147 ProSiteProfiles Response regulatory domain profile. 19 146 IPR001789 GO:0000160
Viun9g01937 147 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 145 IPR045279 GO:0009736
Viun9g01937 147 FunFam Two-component response regulator ORR5 18 147 - -
Viun9g01937 147 CDD REC_typeA_ARR 20 141 - -
Viun9g01937 147 Pfam Response regulator receiver domain 20 140 IPR001789 GO:0000160
Viun9g01937 147 SUPERFAMILY CheY-like 18 145 IPR011006 -
Viun9g01937 147 SMART REC_2 18 142 IPR001789 GO:0000160
Viun9g01937 147 Gene3D - 19 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01937 Viun-Chr9 29277674 29279783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01937 5 147 Response Regulator Gene Family AT3G56380 68.966 3.27e-64 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun9g01937 Response_reg 2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01937 K14492 - gmx:100499827 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01598 8 26847899 26849255 Viun9g01937 9 29277674 29279783 PCT