Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01918 ATGACGAGGTCGACACAGATAATGGCTCTTCATCACCGCTTCTTGCTTGACTCCAATTCAAGCACGCCTGCACCAAGTAACGTGAATAGGACAAGAGAGGCTTTCACAGGTGATGCAAATTTTGACACCAATATGGTGATTATCTTGGCTGCGTTGCTTTGTGCGCTTATATGTGCTTTGGGACTCAACTCAATTGTGCGATGTGCTCTAAGATGTAGCCGCAGGTTTGCTTTCGAGACCCCAGAGGAGACTGCGGCACGTTTGGTGGCAAAAGGCTTAAAGAAGAGTGCATTGCATCAGATCCCTATAGTTGTTTATGGTTCAGGTAGTGTCGGTATTGCAGCCACAGATTGTCCTATTTGCCTTGGGGAGTTTCTGGATGGGGAGAAAGCAATCTTTGCTTGA 405 0.4691 MTRSTQIMALHHRFLLDSNSSTPAPSNVNRTREAFTGDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRFAFETPEETAARLVAKGLKKSALHQIPIVVYGSGSVGIAATDCPICLGEFLDGEKAIFA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01918 134 PANTHER RING-H2 FINGER PROTEIN ATL78 18 130 IPR044602 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01918 Viun-Chr9 29103812 29105111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01918 13 130 C3H Transcription Factor Family AT3G10910 53.175 3.37e-35 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01918 - K19040 pvu:PHAVU_009G143000g 234.572