Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01916 ATGTCGTTCGCTCACCACCGTCGAACCCAATCGGAGATGCTTTTCCGGATCAACGACGACTTTGACCTCGAGGTCGATCTCTCTCCTCCGCATTTCCAAGATCCCACCCCGCCCAACCAATCCGGACCCAAACCCGAATCTCCGCCGCATGAGACCGCCCGCTCGGGTCACCGGAGGAGTAATTCCGCGGACACCTCTTCCTCCTCGCAGCTCGAAGGCATTGAGGCCAAGAAGGCCTTGTCCCCCGATAAGCTCGCCGAACTCTGGACCGTTGATCCCAAACGTGCCAAGAGGATTCTCGCTAACCGTCAATCCGCGGCGCGCTCCAAAGAGAGGAAAGCTTGTTACGTGTCGGAGCTTGAAAGGAAATTTCAATCCCTTCAAACGGAAGCAACCACTCTCTCTGCTCAATTAAGTCTTTTCCAGAGAGATACAACTGGTCTGAGTTCTGAAAATACGGAGTTGAAGCTTAGGTTACAAGCCATGGAACAACAAGCTAAGTTGTGTGATGCTCTAAATGAAGCACTGAAGAAAGAACTTGATAGGCTGAGGATTGCAACTGGAGAGATAGCAATGCCCGCTGATAACTATGGCTTGGGAATGCATCAGCTTACATATTCTCAAGGACCGTTTTTCTCACATCAGCCACAACATGGGCAGAGTGCATTTCAGGCCACGCAAATGCCGCAGATGCATTCACTCTCATCTAATGTGTCTACTTCCAATGAGCCTCTGTTTGATCTAGACATTCCCTATGATATGTCCGAAATGTTGTCGAATGAATCTATCGGACAGTTTCAGGGGCTGGACATAGGCAACGGGGTTTCTCAGGTTCTGATCCCAGATTATCCCTCCAATTTCTGTTAA 867 0.4994 MSFAHHRRTQSEMLFRINDDFDLEVDLSPPHFQDPTPPNQSGPKPESPPHETARSGHRRSNSADTSSSSQLEGIEAKKALSPDKLAELWTVDPKRAKRILANRQSAARSKERKACYVSELERKFQSLQTEATTLSAQLSLFQRDTTGLSSENTELKLRLQAMEQQAKLCDALNEALKKELDRLRIATGEIAMPADNYGLGMHQLTYSQGPFFSHQPQHGQSAFQATQMPQMHSLSSNVSTSNEPLFDLDIPYDMSEMLSNESIGQFQGLDIGNGVSQVLIPDYPSNFC 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01916 288 MobiDBLite consensus disorder prediction 59 74 - -
Viun9g01916 288 Coils Coil 117 137 - -
Viun9g01916 288 Coils Coil 159 182 - -
Viun9g01916 288 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 92 155 IPR004827 GO:0003700|GO:0006355
Viun9g01916 288 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 46 234 - -
Viun9g01916 288 SMART brlzneu 90 154 IPR004827 GO:0003700|GO:0006355
Viun9g01916 288 Gene3D - 93 146 - -
Viun9g01916 288 SUPERFAMILY Leucine zipper domain 94 148 IPR046347 GO:0003700|GO:0006355
Viun9g01916 288 FunFam probable transcription factor PosF21 93 146 - -
Viun9g01916 288 MobiDBLite consensus disorder prediction 31 45 - -
Viun9g01916 288 MobiDBLite consensus disorder prediction 24 77 - -
Viun9g01916 288 CDD bZIP_plant_RF2 95 144 IPR044759 GO:0003700|GO:0006355
Viun9g01916 288 Pfam bZIP transcription factor 94 152 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01916 Viun-Chr9 29086876 29090519 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01916 5 271 bZIP Transcription Factor Family AT2G40620 47.826 6.77e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun9g01916 bZIP_1 6.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01916 - - gmx:100807712 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01916 9 29086876 29090519 Viun9g01916 9 29086876 29090519 ECH