Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01873 ATGGAACACTATTTTGGAAACCCTAATTTCCGTCACTCTGCCATGCTCAACATGGCACCATCTCCCTCCTCCGACTTCATCATATCTGATTATCTCATCTTGGAAGATGTTGTTGATTATCATCATGAAGAGTGTTGGTCGCAAAGCACTGAAACTGAATCATCGGAGAAAGCAAACTCCAGTGATGCCAGTCATGGATTTGGTGATGCAACCTCCACCACCAACAAAAACATAAAGTGCAAAAATAAAGGGATTCAGCAAAAGAAGGCAGAAGTGACTCAAAGCATCACGTTTAGAACAAGATCGCAGCTCGAGATCATGGATGATGGATATAAATGGAGGAAATATGGAAAGAAGACAGTGAAGAACAATTCCAACCCCAGGAACTATTACAAGTGTTCAGGTGAAGGATGCAGTGTGAAGAAAAGGGTGGAAAGGGACCGAAATGACTCCAACTATGTTCTAACAACGTATGTTGGTGTCCACAATCACCACACTCCGTCTTCCTATTATACCCAAATGCCTTTGCTGCATTCTGATGATTGGAACCTTCACCCTTCTGCAACTCAAAACTCATAG 579 0.4249 MEHYFGNPNFRHSAMLNMAPSPSSDFIISDYLILEDVVDYHHEECWSQSTETESSEKANSSDASHGFGDATSTTNKNIKCKNKGIQQKKAEVTQSITFRTRSQLEIMDDGYKWRKYGKKTVKNNSNPRNYYKCSGEGCSVKKRVERDRNDSNYVLTTYVGVHNHHTPSSYYTQMPLLHSDDWNLHPSATQNS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01873 192 ProSiteProfiles WRKY domain profile. 102 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01873 192 Gene3D WRKY domain 90 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01873 192 SUPERFAMILY WRKY DNA-binding domain 99 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01873 192 SMART WRKY_cls 107 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01873 192 MobiDBLite consensus disorder prediction 48 79 - -
Viun9g01873 192 FunFam WRKY transcription factor 57 93 167 - -
Viun9g01873 192 Pfam WRKY DNA -binding domain 108 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01873 192 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 170 IPR044810 GO:0003700
Viun9g01873 192 MobiDBLite consensus disorder prediction 51 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01873 Viun-Chr9 28541056 28543666 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01873 43 185 WRKY Transcription Factor Family AT5G64810 51.724 7.09e-42 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g01873 WRKY 7.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01873 - - gmx:100127396 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01873 9 28541056 28543666 Viun9g01873 9 28541056 28543666 ECH