Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01870 ATGATGTCAACAACGTCTCAAACAAGTGTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCAACGCAGATGGGGTTCAATATTCCTTTTCCATCAACCCAGGCTTTCGCTCCTCTGGAAACCCTATTTTCAACCGCAGTTCAAAGACCACGACAAGATCTCACTTCAAGCTTGGTAGGAGGAGGAGGAGGACAACTCCTTTCCTTGAACAGATCGAGACTGAATCCATGGGCATGGGAAGAAGTAACCGATTGCTTGATGAGTAAAAGAATGGGAGGAGACGATAATCATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATGAAGGCAAGGAGAAAGGTGCGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAATACACAGCACCCGAGAAGCTACTACCGTTGCACTCAAGATAACTGTAGAGTGAAGAAACGCGTGGAGCGGTTGGCGGAGGATCCAAGGATGGTGATAACCACATATGAGGGGAGACATGTGCACTCGCCATCAAATGAACTTGAAGATTCACAATCTCCTTCTGAACTTAGTAGCTTCTTGTGGTAG 633 0.4597 MMSTTSQTSVNHSLFEEQDQIPTQMGFNIPFPSTQAFAPLETLFSTAVQRPRQDLTSSLVGGGGGQLLSLNRSRLNPWAWEEVTDCLMSKRMGGDDNHHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQSPSELSSFLW 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01870 210 FunFam WRKY transcription factor 57 119 193 - -
Viun9g01870 210 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01870 210 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 98 195 IPR044810 GO:0003700
Viun9g01870 210 MobiDBLite consensus disorder prediction 185 210 - -
Viun9g01870 210 ProSiteProfiles WRKY domain profile. 128 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01870 210 SMART WRKY_cls 133 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01870 210 SUPERFAMILY WRKY DNA-binding domain 125 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01870 210 Gene3D WRKY domain 120 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01870 210 MobiDBLite consensus disorder prediction 195 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01870 Viun-Chr9 28458336 28461588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01870 103 210 WRKY Transcription Factor Family AT4G39410 78.761 9.47e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g01870 WRKY 8.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01870 - - gmx:100127389 364.385