Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01869 ATGATGTCAACAACGTCTCAAACAAGTGTTAACCATAGCTTGTTTGAAGAGCAAGATCAGATCCCAACGCAGATGGGGTTCAATATTCCTTTTCCATCAACCCAGGCTTTCGCTCCTCTGGGTTGCCATCAATCTTTGAAATCCATCAGTGCAATGGTTCCTTCACTTTCATCTGAACCTGCTTCTTCTGCTGCGAATTTTGCAGAAACCCTATTTTCAACCGCAGTTCAAAGACCACGACAAGATCTCACTTCAAGCTTGGTAGGAGGAGGAGGAGGACAACTCCTTTCCTTGAACAGATCGAGACTGAATCCATGGGCATGGGAAGAAGTAACCGATTGCTTGATGAGTAAAAGAATGGGAGGAGACGATAATCATCATCATCTAGGGGTTTCTGCCATGAAGATGAAGAAAATGAAGGCAAGGAGAAAGGTGCGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAATACACAGCACCCGAGAAGCTACTACCGTTGCACTCAAGATAACTGTAGAGTGAAGAAACGCGTGGAGCGGTTGGCGGAGGATCCAAGGATGGTGATAACCACATATGAGGGGAGACATGTGCACTCGCCATCAAATGAACTTGAAGATTCACAATCTCCTTCTGAACTTAGTAGCTTCTTGTGGTAG 717 0.4561 MMSTTSQTSVNHSLFEEQDQIPTQMGFNIPFPSTQAFAPLGCHQSLKSISAMVPSLSSEPASSAANFAETLFSTAVQRPRQDLTSSLVGGGGGQLLSLNRSRLNPWAWEEVTDCLMSKRMGGDDNHHHLGVSAMKMKKMKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQSPSELSSFLW 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01869 238 ProSiteProfiles WRKY domain profile. 156 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01869 238 FunFam WRKY transcription factor 57 147 221 - -
Viun9g01869 238 Gene3D WRKY domain 148 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01869 238 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 223 IPR044810 GO:0003700
Viun9g01869 238 SUPERFAMILY WRKY DNA-binding domain 153 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01869 238 MobiDBLite consensus disorder prediction 223 238 - -
Viun9g01869 238 MobiDBLite consensus disorder prediction 217 238 - -
Viun9g01869 238 Pfam WRKY DNA -binding domain 162 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01869 238 SMART WRKY_cls 161 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01869 Viun-Chr9 28458171 28461589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01869 43 238 WRKY Transcription Factor Family AT4G39410 48.780 1.00e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g01869 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01869 - - gmx:100127389 390.578