Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01868 ATGAAAGCCCTGTACAGAGGCTCTCTCTTTCTCATATTCTCCTTCATCTTCTTCTTTACTGGGACATCTTCTTCTTCTTCTTCTTCTTCTGCACTTCCCACCACAGACCCTTCTCACCAACTCCTCTCCTTCAAAGCCTCTCTCCCCAATCCAGCCCTGCTACCCAACTGGCTCCCCAACCAGAGTCCCTGTTCCTTCACCGGTATCACTTGCAACCAGACCCACCTCACCTCCATAGACCTCACCTCCATCCCTCTCAACACCAACTTCTCCATTGTAGCCACCTACCTCCTCACCCTCGACCACCTCCAGTTCCTCACCCTCAAATCCACCAACCTGTCAGGCCCTCCCACCATTCCTCTCTCTCATTCCAAGTGCACTTCCTCCCTATCCGCCCTAGATCTGTCTCAGAACACTCTCTCCGGTTCCCTCAACGACATGTCCTTTCTTGCTTCATGTTCAAACCTCCAATCTCTCAACCTCTCTAGTAACCTTCTCGAGTTCAACTCCTCCTCCCACTGGAAACTCAACCTCCGCGTCGCAGACCTCTCCAACAACAAGATTTCCGGTCCCGGCATCGTCCTCTGGCTTCTCAACCCCGACATCGAACACCTGGCGCTCAAGGGGAACAAAATAACCGGAGATGTCGACTTCTCAGCTTCCACTTCTCTCCGCCACTTGGACCTTTCCTCCAACAACTTCTCCGTCGCTATTCCTTCCTTTGGCGACTGTTCCTCACTTACATACTTGGACCTCTCTGCCAACAAATACTTTGGCGACATTGCTTCCACTCTCTCACCTTGCAAGGCTCTCCTCTACCTCAACGTCTCCAGTAACCAGTTCACTGGTCTCCTTCCTTCCCTCCCTCTTGGCTCTCTCCAGTTTGTCTACCTCGCCGCCAACCACTTCCATGGCCTGATTCCTCCTGCACTCGCCGACCTTTGCTCCACCCTCGTACAGCTGGATCTCTCTTCCAACAATCTCACCGGTGACCTCCCACGCGCCTTCGGCGCGTGCTCTTCACTCGAATCGTTGGACATCTCGAGCAACCTCTTCTCCGGGGCGTTGCCGATGGAGGTTTTGACTCAAATGAGCAGTCTGAGGGAACTTGCTGTGGCCTTCAACGAGTTCGGCGGTCCTGTACCTGTGTCGCTGTCGAAACTTTCCAGTTTGGAATTGCTGGATCTGAGTTCCAACAACTTCAGCGGGCCAATCCTTGGAACGCTGTGCGGAGGAGATGCTGGGAATAACTTAAAGGAACTTTACCTGCAGAATAACCGGTTCACGGGTTTTATTCCTCCCACGCTCAGCAACTGTTCCAACCTTGTTGCCTTGGACTTGAGCTTCAACTTTCTGACGGGGACCATCCCTCCAAGCCTAGGGTCGCTCTCGAAGCTTCGAGACTTAATTATCTGGCTGAACCAGCTCCACGGAGAGATACCTCAGGAGCTGATGTATATGAAGAGTCTGGAGAATCTTATCCTGGATTTCAACGAGTTGAGTGGGAACATTCCCTCTGGCCTCGTCAACTGCACCAAGCTCAATTGGATCTCCCTCTCCAACAACAGGCTAAGCGGCCCGATACCAGCCTGGATTGGGAAGCTTTCCAATCTGGCCATACTCAAACTCAGTAATAACTCCTTCTCCGGCCAGATTCCCCCGGAGCTTGGCGATTGCAATAGTCTGATATGGTTGGATCTGAATACTAACTCCCTCACAGGGCCCATTCCGCCTGAACTGTCCAAGCAATCGGGGAATATCGCCGTGAATTTCATCAATGGGAAGACTTATGTGTACATAAAGAATGATGGTAGTAAAGAGTGTCATGGAGCGGGGAACTTGCTGGAGTTCGCTGGTATCAGTCAGCAGCAGCTCAACAGGATTTCTACAAAGAACCCCTGCAATTTCACCAGGGTTTATGGAGGTAAGTTGCAGCCAATGTTTAACCATAATGGTTCTATGATATTTTTGGATATCTCCCACAACATGTTGTCAGGCAGTATTCCAAAGGAATTTGGGGTCATGTACTATTTGACCATTCTCAATCTGGGCCACAATAATGTGTCTGGGAGCATTCCTCAGGAGCTTGGGAAGATGAAGAATCTCAACATTCTTGATCTCTCTTATAATAGACTCGAAGGGCAAATCCCCCAGAGCCTTACGGGGCTCTCCTTGCTCACTGAGATTGACTTGTCTAACAACATGCTCTCGGGGACGATTCCTGAGACGGGTCAATTCGATACTTTCCCTGCCCCAAGGTTTCAGAACAACTCTAATCTCTGTGGTGTTCCTCTGGCCGCTTGTGGATCGGACTCGGCAAACAATCCTAGTGCACAGCATATGAAGTCTCACAGGAGACAGGCTTCTCTGGCTGGGAGTGTGGCCATGGGATTGCTGTTCTCCCTCTTCTGCATCTTTGGTTTGATCATAATTGCCATTGAGACCAGAAAGAGGAGGAAGAAGAAAGAGGCTGCCCTTGAGGCCTACATGGATGGTAATTCGCATTCAGGTCCGGCCAATGTGAGCTGGAAGCACACCAGTACGCGTGAAGCGCTTAGCATAAACCTTGCAACTTTTGAGAAGCCCCTCCGAAAGCTTACTTTTCAGGACCTTCTTGACGCAACCAATGGCTTTCACAATGACAGTCTCATTGGCTCTGGTGGGTTTGGTGATGTGTACAAGGCTCAATTGAAGGACGGAAGTGTTGTTGCCATCAAGAAGCTGATTCATGTCAGCGGACAAGGGGACAGAGAGTTCACTGCTGAAATGGAGACTATTGGAAAAATCAAGCACAGGAACCTTGTTCCCTTGCTGGGATACTGCAAGGTTGGGGAGGAGAGGCTCCTAGTTTATGAGTATATGAAATATGGAAGCTTGGAGGATGTTCTCCATGATCAGAAGAAAGCTGGGATAAAGCTGAACTGGTCAATTAGAAGGAAAATTGCCATTGGAGCTGCTAGGGGATTGGCTTTTCTTCACCACAACTGTATCCCTCACATCATTCATAGAGACATGAAGTCAAGCAATGTGTTGCTTGATGAAAACCTGGAAGCCAGGGTGTCTGATTTTGGAATGGCGAGACTTATGAGTGCTATGGATACACATTTAAGTGTGAGCACACTGGCTGGCACCCCGGGGTATGTTCCTCCCGAGTACTACCAGAGTTTCAGATGCTCCACTAAAGGTGATGTCTACAGTTATGGGGTGGTTTTGCTGGAGCTGCTAACTGGGAAAAGGCCAACGGACTCGGCTGATTTTGGTGACAATAATCTTGTTGGATGGGTTAAACAACATGCGAAGCTGAAAATAAGTGATATTTTTGATCAGGAGCTCATGAAGGAAGACCCCAATCTGGAGATGGAGCTTTTGCAGCACCTGAAGATTGCGTGTTCCTGTTTGGATGATAGGCCATGGAGACGTCCCACCATGATTCAAGTTATGGCAATGTTCAAACAGATTCAGGTAGGATCTGGGATCGATTCTCAGTCAACTATAGCCACCGATGAGGAAGGTTTCAATGCCGTTGAAATGGTGGAGATGAGCATTAAAGAAGCCCCTGAATTGAGCAAACATTAG 3576 0.4936 MKALYRGSLFLIFSFIFFFTGTSSSSSSSSALPTTDPSHQLLSFKASLPNPALLPNWLPNQSPCSFTGITCNQTHLTSIDLTSIPLNTNFSIVATYLLTLDHLQFLTLKSTNLSGPPTIPLSHSKCTSSLSALDLSQNTLSGSLNDMSFLASCSNLQSLNLSSNLLEFNSSSHWKLNLRVADLSNNKISGPGIVLWLLNPDIEHLALKGNKITGDVDFSASTSLRHLDLSSNNFSVAIPSFGDCSSLTYLDLSANKYFGDIASTLSPCKALLYLNVSSNQFTGLLPSLPLGSLQFVYLAANHFHGLIPPALADLCSTLVQLDLSSNNLTGDLPRAFGACSSLESLDISSNLFSGALPMEVLTQMSSLRELAVAFNEFGGPVPVSLSKLSSLELLDLSSNNFSGPILGTLCGGDAGNNLKELYLQNNRFTGFIPPTLSNCSNLVALDLSFNFLTGTIPPSLGSLSKLRDLIIWLNQLHGEIPQELMYMKSLENLILDFNELSGNIPSGLVNCTKLNWISLSNNRLSGPIPAWIGKLSNLAILKLSNNSFSGQIPPELGDCNSLIWLDLNTNSLTGPIPPELSKQSGNIAVNFINGKTYVYIKNDGSKECHGAGNLLEFAGISQQQLNRISTKNPCNFTRVYGGKLQPMFNHNGSMIFLDISHNMLSGSIPKEFGVMYYLTILNLGHNNVSGSIPQELGKMKNLNILDLSYNRLEGQIPQSLTGLSLLTEIDLSNNMLSGTIPETGQFDTFPAPRFQNNSNLCGVPLAACGSDSANNPSAQHMKSHRRQASLAGSVAMGLLFSLFCIFGLIIIAIETRKRRKKKEAALEAYMDGNSHSGPANVSWKHTSTREALSINLATFEKPLRKLTFQDLLDATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQKKAGIKLNWSIRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHAKLKISDIFDQELMKEDPNLEMELLQHLKIACSCLDDRPWRRPTMIQVMAMFKQIQVGSGIDSQSTIATDEEGFNAVEMVEMSIKEAPELSKH 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01868 1191 Pfam Leucine Rich repeats (2 copies) 222 265 IPR025875 -
Viun9g01868 1191 SUPERFAMILY L domain-like 57 235 - -
Viun9g01868 1191 FunFam Leucine-rich repeat receptor protein kinase EMS1 307 408 - -
Viun9g01868 1191 FunFam Serine/threonine-protein kinase BRI1-like 1 592 649 - -
Viun9g01868 1191 SMART serkin_6 878 1150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01868 1191 FunFam serine/threonine-protein kinase BRI1-like 2 839 953 - -
Viun9g01868 1191 SMART LRR_typ_2 723 746 IPR003591 -
Viun9g01868 1191 SMART LRR_typ_2 487 511 IPR003591 -
Viun9g01868 1191 SMART LRR_typ_2 417 439 IPR003591 -
Viun9g01868 1191 SMART LRR_typ_2 699 722 IPR003591 -
Viun9g01868 1191 SMART LRR_typ_2 535 559 IPR003591 -
Viun9g01868 1191 SMART LRR_typ_2 290 313 IPR003591 -
Viun9g01868 1191 SMART LRR_typ_2 388 412 IPR003591 -
Viun9g01868 1191 ProSiteProfiles Protein kinase domain profile. 878 1155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01868 1191 SUPERFAMILY L domain-like 382 752 - -
Viun9g01868 1191 PRINTS Leucine-rich repeat signature 699 712 - -
Viun9g01868 1191 PRINTS Leucine-rich repeat signature 130 143 - -
Viun9g01868 1191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1000 1012 IPR008271 GO:0004672|GO:0006468
Viun9g01868 1191 CDD STKc_IRAK 884 1153 - -
Viun9g01868 1191 Gene3D Phosphorylase Kinase; domain 1 839 953 - -
Viun9g01868 1191 Pfam Protein kinase domain 878 1148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01868 1191 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 72 288 - -
Viun9g01868 1191 FunFam Brassinosteroid LRR receptor kinase 954 1155 - -
Viun9g01868 1191 Pfam Leucine rich repeat N-terminal domain 40 72 IPR013210 -
Viun9g01868 1191 Pfam Leucine rich repeat 293 351 IPR001611 GO:0005515
Viun9g01868 1191 Pfam Leucine rich repeat 678 736 IPR001611 GO:0005515
Viun9g01868 1191 Pfam Leucine rich repeat 417 474 IPR001611 GO:0005515
Viun9g01868 1191 Pfam Brassinosteroid receptor island domain 585 649 IPR045381 -
Viun9g01868 1191 SUPERFAMILY Protein kinase-like (PK-like) 864 1155 IPR011009 -
Viun9g01868 1191 ProSitePatterns Protein kinases ATP-binding region signature. 884 907 IPR017441 GO:0005524
Viun9g01868 1191 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 647 768 - -
Viun9g01868 1191 Gene3D Transferase(Phosphotransferase) domain 1 954 1155 - -
Viun9g01868 1191 SUPERFAMILY L domain-like 176 405 - -
Viun9g01868 1191 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 412 588 - -
Viun9g01868 1191 Gene3D - 590 650 - -
Viun9g01868 1191 Gene3D Ribonuclease Inhibitor 41 768 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01868 Viun-Chr9 28418190 28422344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01868 39 1187 Receptor kinase-like Gene Family AT4G39400 69.218 0.0 1527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Viun9g01868 Pkinase 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01868 K13415 - gmx:100499629 1973.36