Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01865 ATGGTTCCAGAGGATGCTGCTAAAGAAAGTAAGAGTAGTAAAGATTTGGATTCTAATGAGTCCAAGAATGAATTTGTGGATGGGTGGCCGAAGTGGTTACTCGATAACATCCCCACCAATGTTCTCGCTAAGCTTGTCCCCAAGAGCGCTGATTCCTATGAAAAACTTGCCAAGATAGGACGTGGAACGTATAGCAATGTGTACAAAGCGAGAGAGAAGGGCACGGGAAAGATTGTTGCTTTGAAGAAGGTAAGGTTTGACACGTCGGATTCTGAAAGCATAAAGTTTATGGCAAGAGAGATCATGATGTTGCAGAAGCTTGATCATCCCAATGTCATCAAGCTTAAAGGATTAGCTACATCGAGAATGCAGTACAGTCTTTATCTGGTTTTTGACTTCATGCAGTCTGATCTCACTCGCATTATCTCTCGACCCGGGGAGACACTCACCGAACCGCAGATCAAGTGCTATATGCAGCAGCTACTTTGTGGTCTGCAGCACTGTCACGAGAGGGGAATTATGCACCGAGATATTAAGGCTTCTAACTTGTTAATAGACAGAAAAGGGGTGCTGAAAATTGCAGATTTTGGGCTTGCAACTTCCATTGAATCTGGAAAACCTCTAACAAATAGAGTGGTAACACTTTGGTATAGAGCTCCAGAACTTCTTTTGGGTTCAACTGATTATGGATATAGCATTGATCTCTGGAGTGCAGGGTGCCTCTTGGCTGAGATGTTTGTCGGAAGACCAATTATGCCTGGCAGGACAGAGGTTGAACAGATTCAGATGATTTTCAAACTTTGTGGTTCTCCTTCAGAGGATTACTTCAAAAAGCTGAAGCTAACAACTAGCTACCGTCCTACACACCATTACAAACCTACGTACCAAGAAAACTTCAGCAAATTTCCTTCCTCTTCGCACCCTCTCTTGACCACACTTCTTCATCTCAACCCTACAAATCGTGGAACTGCTGCCTCTGCCCTTCAAACTGAATTCTTCCGATGCAGTCCATTAGCATGTGACCCTTCAGCTTTACCAGTAATCAACAAAGACGAGGATGAACGCTTACAAACTAAGAGAACCAAAAGTAGGCACAGGGTTTCCAAAAGAGCGCAACCATCTCAAACAAGTAAAAGTGAAGCTGAATCACGAAAAACCCAGATTCCCGAACAACCTCGTCAAGTTACAGAATCATCAAAAGAGAAGAATGTGGAACAACAGAAGCAGAGTCAAGAAACTGTGCATAGTGCTACTAGCAGCACATCATCTGGGTCAAGACCATTCACGAATGAAGGGAGCACAAATACATCTTTATCACCAAGTTTTCTGTCCAGTGGCAGTGTGAGAAAATCTCCCAAAACAGAGGGTAGCCCAAATGCTCTTAAGAACATAAACCACTATAATGCACTCTTACAGGCCTCTATGATTCAAGCCACCCAAGTTCCTCATCTTCCAAAATCCTTCTCTCACTTGGATTATCGACTTGGTCCAGACAAGCTACCAAACCTCTATACCTTATCTAATAAACATATTTAA 1536 0.4297 MVPEDAAKESKSSKDLDSNESKNEFVDGWPKWLLDNIPTNVLAKLVPKSADSYEKLAKIGRGTYSNVYKAREKGTGKIVALKKVRFDTSDSESIKFMAREIMMLQKLDHPNVIKLKGLATSRMQYSLYLVFDFMQSDLTRIISRPGETLTEPQIKCYMQQLLCGLQHCHERGIMHRDIKASNLLIDRKGVLKIADFGLATSIESGKPLTNRVVTLWYRAPELLLGSTDYGYSIDLWSAGCLLAEMFVGRPIMPGRTEVEQIQMIFKLCGSPSEDYFKKLKLTTSYRPTHHYKPTYQENFSKFPSSSHPLLTTLLHLNPTNRGTAASALQTEFFRCSPLACDPSALPVINKDEDERLQTKRTKSRHRVSKRAQPSQTSKSEAESRKTQIPEQPRQVTESSKEKNVEQQKQSQETVHSATSSTSSGSRPFTNEGSTNTSLSPSFLSSGSVRKSPKTEGSPNALKNINHYNALLQASMIQATQVPHLPKSFSHLDYRLGPDKLPNLYTLSNKHI 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01865 511 MobiDBLite consensus disorder prediction 372 394 - -
Viun9g01865 511 Gene3D Transferase(Phosphotransferase) domain 1 136 423 - -
Viun9g01865 511 FunFam probable serine/threonine-protein kinase At1g54610 40 135 - -
Viun9g01865 511 MobiDBLite consensus disorder prediction 1 23 - -
Viun9g01865 511 FunFam Putative serine/threonine-protein kinase 136 372 - -
Viun9g01865 511 PANTHER CELL DIVISION PROTEIN KINASE 51 339 - -
Viun9g01865 511 SMART serkin_6 53 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01865 511 MobiDBLite consensus disorder prediction 351 461 - -
Viun9g01865 511 MobiDBLite consensus disorder prediction 409 461 - -
Viun9g01865 511 ProSiteProfiles Protein kinase domain profile. 53 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01865 511 ProSitePatterns Protein kinases ATP-binding region signature. 59 82 IPR017441 GO:0005524
Viun9g01865 511 Gene3D Phosphorylase Kinase; domain 1 41 135 - -
Viun9g01865 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Viun9g01865 511 SUPERFAMILY Protein kinase-like (PK-like) 48 336 IPR011009 -
Viun9g01865 511 Pfam Protein kinase domain 53 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01865 Viun-Chr9 28348549 28352409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01865 48 468 Core Cell Cycle Gene Families AT5G10270 40.271 8.37e-97 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Viun9g01865 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01865 K08819 - gmx:100782603 764.607