Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01842 ATGAGACCCCTTTTCCAAACGAAGCAGTTGTTGGCGGTTAGGGTTCAGAGGCATCAGTTATGGCACGACTCTCGAGACGTGAAGGTTTCGGTGTGGTGGGATTTCGAGAACTGCCAGGTGCCGGCGGGGGTTGACGCTTCGAAGGTGGCGCCGGCGATCACGAAGGCGGTGAGAGCGAGTGGTATTAAGGGCCCTCTCCGAATCAACGCTTTTGGTGATGTTCTGTTGCTGTCAAAATCCAACCAGCAAGCACTTTCTCACACCGGCATTGATTTCACCCACATTCCAGGTGGAAAGAACAGTGCCGATAGATTTATTCTCATGAATCTTATGGACTGGGTTTCTCAAAATCCTCCTCCTGCCCATCTCTTTTTGATATCTGCTGATGGAGACTTTGCTAGAATGTTACACCAGTTAAGAATGCATAATTACAATATATTACTTGCTAGCACAAGGAATGCTCCTGGTGTCCTCTGTAGTGCAGCAACTATAATATGGCAATGGTCTTCATTAATAAAGGGGGAACATCTCTCTGGAAAACATTTAAACCTTCCTCCTGATGGTTTGTTTAGTTCTTGGTATGGAAATTACAATGTGATTCCTGACAAACCATTCTCAGATGTTGAGAAGTCTGCATCTTCACAAAAAGTGAACATATACAAACCTTCCTTAGATTTGCAAACTGTTCCAAAAAAAGTTGTAATACAGGTTTGCCGTATATTGAGATCACATCCAAAAGGAATCTCAATTGGAGATCTTCTTATAGAGTTGAAGAAACGTAAAGTGAATTTTGGTAAAAAGTTTTATGGATGTGGCACATTTTCTCGCTTTCTACTATCAACACTGCATGTAGAGCTTGAGCCTTTAGGCTTTGGTAATTTTCATGTATGTCTGATCTCCTCAGAATCCCCCAAACCTTTTGAGGGCAAAGATGTGGAATCAGTATCATCTTGTATAAAGATGGATGAGAAGGGATCTGTAGCAACTCCAAAGCTAAATGGTGAGGATAAAAACAAGGTTAGAAAAGCAAATTGGACACCCTTAACTGCCTCATCCCATGAAAGGAGTATGGATGATGATTCAAAATCATCACTTTTATCGGTTGAAAGCCCAGATGCGTTGCAGAAATTTTCAGTGCATAGTGGGAAGGTTGTTGATATGACTACTGAACAACTGTCAGGGTTTCAACCACAACACAGGCACAACCAACTTTCCAAAACTAAGCCAGATTCCTTAAAATTGAGTTCAAGTTCTAAAACATTATCTGGTTGTGACACTGTTGGCTCTGAGGATGCAATTTATAGAATTCAGGAAAAGTACACAACTTCAAGGAATCACTCTGCTGGAAATAATCAGACAGCAAAAGAAGACATTGTTTTTGTAACCTATGAATCTGCTAATGTTAGAGCAATGAACAAATACGAGAATTCAACTAGAAAAGAGGTTGATGAAGTTTGTCACTGCCCATATTCTACAGAAGCTGATCACTCTCTGCTTGACAAAATACCTAGTGGAAGTGATAAAACTAATAGGAATGGTCCAACATTCTTTGTCTGGATCAGAAACTGGTGGCAATTTTGGAAAGGAAATGCAGAATCTGATGTTTCAGCTGATTGTCATAACAAGGTGGTTAGTCATTTCAAGGATTCTAACCCATCTGAGCTCGTAGAGCAAACAGTTCAGGTTGTGAGTGATTTTAAAGAACCCAATTTATCAGAGCTGGACCAGCCTGAGTTATTTTCTAGCGGTTGCTTTTGGGATGACATAGAAACTTTTGTTTCCACGCTCAAAGGATCATTTATTGTTTCCCAGTCGAAAAACAGGGAGGATATGGCGTATAAATTGCTAAATGATGGACCCCCAGTTTTAAGATCTCTCACTGAAGAAGATATTCTTCAATTGGTGGAGTTGTTAATATCAGAGAAAAAGTGGCTGGAGGAAATCCCGTCCCAAATATTTCCTTTTAGGGTAATTAAACCAGTTCAGGGGAAGTCATTGACGGGCCAATCTCAGGCTGCAAATGGTTTGAGGTCCCTCTTTCTGAGCAGATCGTCACAATCCAAGTTGCAAAAATCATCTGAACATAAGAGTATTCCTAAATCTGGAGTTTCTGCAACTGATACTGAAACGAAATATAAGGGGATGTCTATAAAGGATATATTAGAAGATTGTTAG 2175 0.4051 MRPLFQTKQLLAVRVQRHQLWHDSRDVKVSVWWDFENCQVPAGVDASKVAPAITKAVRASGIKGPLRINAFGDVLLLSKSNQQALSHTGIDFTHIPGGKNSADRFILMNLMDWVSQNPPPAHLFLISADGDFARMLHQLRMHNYNILLASTRNAPGVLCSAATIIWQWSSLIKGEHLSGKHLNLPPDGLFSSWYGNYNVIPDKPFSDVEKSASSQKVNIYKPSLDLQTVPKKVVIQVCRILRSHPKGISIGDLLIELKKRKVNFGKKFYGCGTFSRFLLSTLHVELEPLGFGNFHVCLISSESPKPFEGKDVESVSSCIKMDEKGSVATPKLNGEDKNKVRKANWTPLTASSHERSMDDDSKSSLLSVESPDALQKFSVHSGKVVDMTTEQLSGFQPQHRHNQLSKTKPDSLKLSSSSKTLSGCDTVGSEDAIYRIQEKYTTSRNHSAGNNQTAKEDIVFVTYESANVRAMNKYENSTRKEVDEVCHCPYSTEADHSLLDKIPSGSDKTNRNGPTFFVWIRNWWQFWKGNAESDVSADCHNKVVSHFKDSNPSELVEQTVQVVSDFKEPNLSELDQPELFSSGCFWDDIETFVSTLKGSFIVSQSKNREDMAYKLLNDGPPVLRSLTEEDILQLVELLISEKKWLEEIPSQIFPFRVIKPVQGKSLTGQSQAANGLRSLFLSRSSQSKLQKSSEHKSIPKSGVSATDTETKYKGMSIKDILEDC 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01842 724 Gene3D - 21 168 - -
Viun9g01842 724 Pfam NYN domain 28 162 IPR021139 GO:0004540
Viun9g01842 724 MobiDBLite consensus disorder prediction 327 365 - -
Viun9g01842 724 PANTHER LIMKAIN B LKAP 15 694 IPR024768 GO:0005777|GO:0010468
Viun9g01842 724 CDD PIN_limkain_b1_N_like 28 150 - -
Viun9g01842 724 ProSiteProfiles OST-type HTH domain profile. 229 300 IPR025605 -
Viun9g01842 724 MobiDBLite consensus disorder prediction 393 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01842 Viun-Chr9 28032006 28035740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01842 23 174 C2H2 Transcription Factor Family AT5G61190 45.752 4.92e-36 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01842 - - vun:114196141 1410.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01842 9 28032006 28035740 Viun9g01842 9 28032006 28035740 ECH