Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01841 ATGAAAATAAAGATGTGGAAAATGGGTGAACCAAAGCCATATTTGGCAATGTTTGTAGTGCAATTGATATATTCAGGGCTAACCTTGCTGTCCAAGGCTGTGTTCAACAGGGGAATGAATACCTTTGTGTTTATATTTTACAGACAGGTGATTGGTGCAGTTATTTTGGTTCCTCTGGCCTTCATACTTCAAAAAGAAGTATCAGTGTCACTTTCCTTTTCAACCTTCTGTAAGATTTTTGTGTCTTCATTTTTCGGAGTAACTTTGAGTCTAAATATGCAAGCTATTGCCCTTGTTTACACATCTGCCACTCTGGCCGCTGCAATTGTCAATTCCCTCCCCGCATCTACGTTTTTCTTTGCTGTGTTGCTCAGAATGGAGAAGGTGAATATAAGGACAAAATGTGGAGTTACAAAGATAGCAAGTGTATTTCTGTGTTTGGTTGGTGTAGCCACCCTTGCATTTTACAAGGGACCACAGTTAAGGATTGCTCATCATCATTACTACAATCATCATGAGGATCATTTTTCATCCACCAAAAGATGGGTATTGGGCTCTTTACTTTTGTTCTTAAGCGTCATCATCTGGAGCCTTTGGCTTGTAATTCAGGCTCAAATTCTTAAAAGCTACCCTGCAAAGCTGAAGTTCACGAGCCTTCAGTGTTTATCGAGTTCAATCCAGTCATTTTGTATTGCTATAGCTTTTGAAAGAGATATTGAGCAGTGGAAGTTGGGTTGGGACATGAAACTGCTTGCAGTTGTTTACTGTGGGACACTAGTGACTGGACTCATCTACTACTTGCAAGCTTGGGCCATCCAAAAGAGAGGACCAGTTTTTCCCGCGATGTGGAACCCACTGAGCTTTGTAATTGCTACCACAGGTTCCATATTTCTATTGGGCGAACCCCTGCGTTTGGGAAGTGTGTTGGGAGGTATTGTGCTGATTATAAGCCTCTATAGTGTTCTTTGGGCAAAAAGCAAAGAAGAAGTGAGTCATCATCAGAATTGTTTACCCATAAAAGAATGTGCAGAGGTGAAAACTGAGGGCAGTAGCATGGAACCACACAGTAACACTAATGATTTATTCAAAAATGTTCATTAG 1101 0.4078 MKIKMWKMGEPKPYLAMFVVQLIYSGLTLLSKAVFNRGMNTFVFIFYRQVIGAVILVPLAFILQKEVSVSLSFSTFCKIFVSSFFGVTLSLNMQAIALVYTSATLAAAIVNSLPASTFFFAVLLRMEKVNIRTKCGVTKIASVFLCLVGVATLAFYKGPQLRIAHHHYYNHHEDHFSSTKRWVLGSLLLFLSVIIWSLWLVIQAQILKSYPAKLKFTSLQCLSSSIQSFCIAIAFERDIEQWKLGWDMKLLAVVYCGTLVTGLIYYLQAWAIQKRGPVFPAMWNPLSFVIATTGSIFLLGEPLRLGSVLGGIVLIISLYSVLWAKSKEEVSHHQNCLPIKECAEVKTEGSSMEPHSNTNDLFKNVH 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01841 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Viun9g01841 366 Pfam EamA-like transporter family 13 138 IPR000620 GO:0016020
Viun9g01841 366 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020
Viun9g01841 366 PANTHER WAT1-RELATED PROTEIN 12 334 IPR030184 GO:0016020|GO:0022857
Viun9g01841 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01841 Viun-Chr9 28008217 28018939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01841 7 256 Nodulin-like Gene Family AT5G64700 50.193 7.08e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01841 - - vun:114162763 649.818