Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01838 ATGAAAATAAAGAGGTGGAAAATGGGTGAATTAAAGCCATATTTGGCAATGTTTGTGGTGCAATTGATACAGTCAGGGCTAACCTTGCTGTCCAAGGCTGTGTTTAACAGGGGAATGAATACTTTTGTGTTCATATTTTATAGACAGGTGACTGGTGCACTTATTTTGGTTCCTCTGACCTTGATACATGAAAAGAAAAGCGCAGTGTCAGTGTCACTTTCATTTCCAACCTTCTGCAAGATTTTTGCGAATTCATTTCTCGGACTAACTTTGAGTCTGAATTTGCAAGCTATTGCTCTTGTTTACACGTCTGCCACTTTGGCTGCTGCAATCATCAATTCCCTCCCTGCATTTACGTTTTTCTTTGCTGTGCTGCTCAGAATGGAAAAGGTGAATATAAGGACAAAATGTGGAGTTACGAAGATAGCAAGTGTATTTCTGTGCCTGGTTGGTGTAGCCACCCTTGCATTTTACAAGGGACCACAGTTAAGGATTGCTCATCATCATTACTACAATCATCATGAGGATCATTTTTCATCCACCAAAAGATGGATATTGGGTTCTTTACTCTTGTTCATAGGCGTCATCATCTGGAGCCTTTGGCTTGTAATTCAGGCTCAGATTCTTAAAAGCTACCCTGCAAAGCTGAAGTTCACGACCCTTCAGTGTTTATCGAGTGCAATTCAGTCATTTGGCATTGCTGTAGCTTTTGAAAGAGACATTGAGCAGTGGAAGTTGGGTTGGGACATGAAACTGCTTGCAGTTGTTTACTGTGTAAGAGTGAAACAAATGGGGATACTAGTGACTGGAGTGATCCACTGCTTGCAAATTTGGGTTATCGAAAAGAGAGGACCAGTTTTTCCTGCGATGTGGAACCCGCTAAGTTTTGCGATTGCTACCACAGGTTCTATATTTCTATTGGGCGAGCCCCTATTTTTGGGAAGTGTGTTGGGAGGTATTGTGCTGATTATAAGCCTCTATAGTGTTCTTTGGGCAAAAAGCAAAGAAGAAGTGAGTCATCATCAGAATTGTTTACCCATAAAAGAATGTGCAGAGGTGAAAACTGAGGGCAGTAGCATGGAACCACACAGTAACACTAATGATTTATTCAAAAATGTTCATTAG 1125 0.4098 MKIKRWKMGELKPYLAMFVVQLIQSGLTLLSKAVFNRGMNTFVFIFYRQVTGALILVPLTLIHEKKSAVSVSLSFPTFCKIFANSFLGLTLSLNLQAIALVYTSATLAAAIINSLPAFTFFFAVLLRMEKVNIRTKCGVTKIASVFLCLVGVATLAFYKGPQLRIAHHHYYNHHEDHFSSTKRWILGSLLLFIGVIIWSLWLVIQAQILKSYPAKLKFTTLQCLSSAIQSFGIAVAFERDIEQWKLGWDMKLLAVVYCVRVKQMGILVTGVIHCLQIWVIEKRGPVFPAMWNPLSFAIATTGSIFLLGEPLFLGSVLGGIVLIISLYSVLWAKSKEEVSHHQNCLPIKECAEVKTEGSSMEPHSNTNDLFKNVH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01838 374 PANTHER WAT1-RELATED PROTEIN 12 342 IPR030184 GO:0016020|GO:0022857
Viun9g01838 374 Pfam EamA-like transporter family 12 140 IPR000620 GO:0016020
Viun9g01838 374 Pfam EamA-like transporter family 186 330 IPR000620 GO:0016020
Viun9g01838 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01838 Viun-Chr9 27991606 28003624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01838 7 260 Nodulin-like Gene Family AT5G64700 49.049 9.31e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01838 - - vun:114162763 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01838 9 27991606 28003624 Viun9g01838 9 27991606 28003624 ECH