Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01825 ATGAGTTTGGCAGGAACAGAAAGCTCAGAGGAGGGGACAGGCCTTCTAGAACCTCCTGATCCCAATATTGTTGAAATTGATCCTACTAATCGCTACATTAGGTATAAAGATGTTATCGGCCAAGGAGCTTTCAAGACTGTTTACAAGGCATTTGATGAAATTAATGGACTTGAAGTTGCATGGAGCCAAATTCATATTGATGAGGTATTACAGTCACCTGGTGGCCCAGATAGGCTGTACTCAGAAGTGCATCTCTTGAAGTCAGTTAAGCACGATAACATCTTGACTTTCCATAATTCTTGGATTGATGATAAGCACAGGACTATGAACTTGATTACTGAGTTATTCACCTCAGGGAACCTCAGACAGTACAGCAAGAAACACAGGAAGGTTGACATGAAGGCTGTTAAAGGATGGGCAAGGCAAATTTTAAATGGTTTAAATTATCTTCACAGTCACAACCCACCTATTATGCATAGGGACCTGAAGTGCGATAATATATTTATCAATGGTCACCGAGGAGAAGTTAAAATTGGAGATCTAGGGTTGGCAACTCTATTAAAACAAACTAATGCCAAGAGTGTAATTGGAACCCCGGAGTTCATGGCACCTGAACTGTATGATGAACATTATAATGAATTAGTGGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGGTTACGTCTGAATATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTGGCATAAAGCCTGTTGCTCTTTCCAAACTCAAAAATCTAGAAGTAAAATCATTTATTGAGAAATGCCTTGTCCCAGCGTCTCAAAGATTGTCAGCAAAGGAGCTTTTGATGGACAATTTTCTGCAAGTGACTGGTTCATTGAAGAATCGTCGTCTACCATTACCAGATATCGTTCTCCCTAAATATGGAGCCTATGAAAATCGTTGTCTTATGTCAGAAGGTCCTGCTAGCACGCGTATTAGATCCATTTCAATGGATCTTGGTGATGCCACCGAGCAACCATTAACCACTTTACTTTATAATTCTGTTGATTCTATTGTTGATTCTGCTGATGATGTTTTGCCTTCTCCTTGTGTTGAGATAAGAAGGTTAAAGGAAGGTGACATTTTTTTTCTAAAAGGTGAACAGAATGATCAAAAGTCTGTGTCATTAGTTCTCCGCATAGCTGATCAAAGTGGACGGGCAAGAAATATCCATTTCATATTCTACATCAACAGTGATACTGCGATTTCAGTTTCAAGTGAAATGGTTGAGCAACTTGAACTGGCTGAGCACAATGTTAAATTCATAGCAGAGTTGATCGATCTATTATTGACCACATTGCTTCCTGATTGGAAACCTTGTGTACCAATTGATCATTTAGTTACTTGTAATGGTAAATCATCTCAACAAAGTCAACAAACACGAAGCTCAAGAGATTCCATCCAAATTGTGTCTGGAGGTGGTCCAGGTCTCCCAATCTCACGTAGAAGATCAAGAGACAGGGTGAGCAGAGACAGGGTGAGCAGAGATAGGGTGAGCAGAGATAGGGTGAGCAGAGATATTGTCATTTCTGAGAAGGTTTTATCTAACACAAGCATTAGCCTTCAAGGAGATGCAAAGATAGACGACTCTTGTTCTGAGACGTCACAAACTGGTGCAACATTTGACTTCAACGAAAAGCATTTTTCTACAGTTTCATTCATGTCTGCTAAATCAGGATTTACAGACTTTGACTTGCACAGAGTTAATAGTCAAACCTCACTTGTATCTGAATTCGAGGCGTCGTCCGAGTATAGGAATTTTCCACGTGCGGAAAGCTATGGTACCATGAAATTCTTTAACTACCCCATGAATGCTCCCCCCTCCTTCAATGAAGCTGAGGATGAGTTGAGAACAGAGTTAGAGATGATTGAACAACAATATCAAGAAGCAATTAGAGATTTATCAAAAAGAAGATATCAGGCCATTACTGAGGCTAGGAGGAAGGTGTCACAGAAATTTCCAAACTTTAAATAA 2025 0.3965 MSLAGTESSEEGTGLLEPPDPNIVEIDPTNRYIRYKDVIGQGAFKTVYKAFDEINGLEVAWSQIHIDEVLQSPGGPDRLYSEVHLLKSVKHDNILTFHNSWIDDKHRTMNLITELFTSGNLRQYSKKHRKVDMKAVKGWARQILNGLNYLHSHNPPIMHRDLKCDNIFINGHRGEVKIGDLGLATLLKQTNAKSVIGTPEFMAPELYDEHYNELVDIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKLKNLEVKSFIEKCLVPASQRLSAKELLMDNFLQVTGSLKNRRLPLPDIVLPKYGAYENRCLMSEGPASTRIRSISMDLGDATEQPLTTLLYNSVDSIVDSADDVLPSPCVEIRRLKEGDIFFLKGEQNDQKSVSLVLRIADQSGRARNIHFIFYINSDTAISVSSEMVEQLELAEHNVKFIAELIDLLLTTLLPDWKPCVPIDHLVTCNGKSSQQSQQTRSSRDSIQIVSGGGPGLPISRRRSRDRVSRDRVSRDRVSRDRVSRDIVISEKVLSNTSISLQGDAKIDDSCSETSQTGATFDFNEKHFSTVSFMSAKSGFTDFDLHRVNSQTSLVSEFEASSEYRNFPRAESYGTMKFFNYPMNAPPSFNEAEDELRTELEMIEQQYQEAIRDLSKRRYQAITEARRKVSQKFPNFK 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01825 674 MobiDBLite consensus disorder prediction 470 513 - -
Viun9g01825 674 FunFam Serine/threonine-protein kinase WNK8 389 483 - -
Viun9g01825 674 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Viun9g01825 674 MobiDBLite consensus disorder prediction 1 23 - -
Viun9g01825 674 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 20 655 - -
Viun9g01825 674 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01825 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Viun9g01825 674 MobiDBLite consensus disorder prediction 470 486 - -
Viun9g01825 674 Gene3D - 389 477 - -
Viun9g01825 674 Coils Coil 626 654 - -
Viun9g01825 674 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01825 674 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01825 674 SUPERFAMILY Protein kinase-like (PK-like) 34 291 IPR011009 -
Viun9g01825 674 CDD STKc_WNK 31 290 - -
Viun9g01825 674 Gene3D Transferase(Phosphotransferase) domain 1 116 296 - -
Viun9g01825 674 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Viun9g01825 674 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
Viun9g01825 674 MobiDBLite consensus disorder prediction 497 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01825 Viun-Chr9 27826675 27830187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01825 133 507 MAP Kinase Kinase Kinase AT1G49160 61.867 2.58e-163 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun9g01825 Pkinase 1.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01825 K08867 - gmx:121175054 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01825 9 27826675 27830187 Viun9g01825 9 27826675 27830187 ECH
Viun3g00875 3 5417971 5421460 Viun9g01825 9 27826675 27830187 PCT