Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01824 ATGAACTTGATTACTGAGTTATTCACCTCAGGGAACCTCAGACAGTACAGCAAGAAACACAGGAAGGTTGACATGAAGGCTGTTAAAGGATGGGCAAGGCAAATTTTAAATGGTTTAAATTATCTTCACAGTCACAACCCACCTATTATGCATAGGGACCTGAAGTGCGATAATATATTTATCAATGGTCACCGAGGAGAAGTTAAAATTGGAGATCTAGGGTTGGCAACTCTATTAAAACAAACTAATGCCAAGAGTGTAATTGGAACCCCGGAGTTCATGGCACCTGAACTGTATGATGAACATTATAATGAATTAGTGGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGGTTACGTCTGAATATCCTTACAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTGGCATAAAGCCTGTTGCTCTTTCCAAACTCAAAAATCTAGAAGTAAAATCATTTATTGAGAAATGCCTTGTCCCAGCGTCTCAAAGATTGTCAGCAAAGGAGCTTTTGATGGACAATTTTCTGCAAGTGACTGGTTCATTGAAGAATCGTCGTCTACCATTACCAGATATCGTTCTCCCTAAATATGGAGCCTATGAAAATCGTTGTCTTATGTCAGAAGGTCCTGCTAGCACGCGTATTAGATCCATTTCAATGGATCTTGGTGATGCCACCGAGCAACCATTAACCACTTTACTTTATAATTCTGTTGATTCTATTGTTGATTCTGCTGATGATGTTTTGCCTTCTCCTTGTGTTGAGATAAGAAGGTTAAAGGAAGGTGACATTTTTTTTCTAAAAGGTGAACAGAATGATCAAAAGTCTGTGTCATTAGTTCTCCGCATAGCTGATCAAAGTGGACGGGCAAGAAATATCCATTTCATATTCTACATCAACAGTGATACTGCGATTTCAGTTTCAAGTGAAATGGTTGAGCAACTTGAACTGGCTGAGCACAATGTTAAATTCATAGCAGAGTTGATCGATCTATTATTGACCACATTGCTTCCTGATTGGAAACCTTGTGTACCAATTGATCATTTAGTTACTTGTAATGGTAAATCATCTCAACAAAGTCAACAAACACGAAGCTCAAGAGATTCCATCCAAATTGTGTCTGGAGGTGGTCCAGGTCTCCCAATCTCACGTAGAAGATCAAGAGACAGGGTGAGCAGAGACAGGGTGAGCAGAGATAGGGTGAGCAGAGATAGGGTGAGCAGAGATATTGTCATTTCTGAGAAGGTTTTATCTAACACAAGCATTAGCCTTCAAGGAGATGCAAAGATAGACGACTCTTGTTCTGAGACGTCACAAACTGGTGCAACATTTGACTTCAACGAAAAGCATTTTTCTACAGTTTCATTCATGTCTGCTAAATCAGGATTTACAGACTTTGACTTGCACAGAGTTAATAGTCAAACCTCACTTGTATCTGAATTCGAGGCGTCGTCCGAGTATAGGAATTTTCCACGTGCGGAAAGCTATGGTACCATGAAATTCTTTAACTACCCCATGAATGCTCCCCCCTCCTTCAATGAAGCTGAGGATGAGTTGAGAACAGAGTTAGAGATGATTGAACAACAATATCAAGAAGCAATTAGAGATTTATCAAAAAGAAGATATCAGGCCATTACTGAGGCTAGGAGGAAGGTGTCACAGAAATTTCCAAACTTTAAATAA 1701 0.3933 MNLITELFTSGNLRQYSKKHRKVDMKAVKGWARQILNGLNYLHSHNPPIMHRDLKCDNIFINGHRGEVKIGDLGLATLLKQTNAKSVIGTPEFMAPELYDEHYNELVDIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKLKNLEVKSFIEKCLVPASQRLSAKELLMDNFLQVTGSLKNRRLPLPDIVLPKYGAYENRCLMSEGPASTRIRSISMDLGDATEQPLTTLLYNSVDSIVDSADDVLPSPCVEIRRLKEGDIFFLKGEQNDQKSVSLVLRIADQSGRARNIHFIFYINSDTAISVSSEMVEQLELAEHNVKFIAELIDLLLTTLLPDWKPCVPIDHLVTCNGKSSQQSQQTRSSRDSIQIVSGGGPGLPISRRRSRDRVSRDRVSRDRVSRDRVSRDIVISEKVLSNTSISLQGDAKIDDSCSETSQTGATFDFNEKHFSTVSFMSAKSGFTDFDLHRVNSQTSLVSEFEASSEYRNFPRAESYGTMKFFNYPMNAPPSFNEAEDELRTELEMIEQQYQEAIRDLSKRRYQAITEARRKVSQKFPNFK 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01824 566 FunFam probable serine/threonine-protein kinase WNK9 8 187 - -
Viun9g01824 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 49 61 IPR008271 GO:0004672|GO:0006468
Viun9g01824 566 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 547 - -
Viun9g01824 566 SMART serkin_6 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01824 566 Coils Coil 518 546 - -
Viun9g01824 566 MobiDBLite consensus disorder prediction 389 405 - -
Viun9g01824 566 SUPERFAMILY Protein kinase-like (PK-like) 2 183 IPR011009 -
Viun9g01824 566 ProSiteProfiles Protein kinase domain profile. 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01824 566 Gene3D - 281 369 - -
Viun9g01824 566 MobiDBLite consensus disorder prediction 362 378 - -
Viun9g01824 566 FunFam Serine/threonine-protein kinase WNK8 281 375 - -
Viun9g01824 566 Pfam Protein kinase domain 2 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01824 566 MobiDBLite consensus disorder prediction 362 405 - -
Viun9g01824 566 Gene3D Transferase(Phosphotransferase) domain 1 8 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01824 Viun-Chr9 27826675 27830187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01824 25 399 MAP Kinase Kinase Kinase AT1G49160 61.867 1.93e-165 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun9g01824 Pkinase 2.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01824 K08867 - gmx:121175054 771.926