Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01812 ATGAGAAAACCCACTAAACCCCCCCCCACCTTCCACCCATTCTCAATCCTCAGATCCACCCTTCTCCTCCTCCTCCTCTCCATGGCGTCCATCTTCTTCCTCTCCCTCTTCTTCTTCCTCAACCTCCAACCTCACTCCTCCGCCGCCGTGGAGATCAACCGAGCCTGCAATGCAACGCGCTACCCACTCCAATGCCACACCTCCCTCATCCCCAAACTCCTAACCAACCCCACCCCTCTCCAAATCATCCAATCCACCATCAGAGCCTCCACCTCCAATCTCGTCACCGCGCGATCCATGCTGCACTCCGTCCGTGACGCCTCCCGAAGCAACCGCACCCGCACTACCAATGTAAAGAGCTGTCTCCAGGTCCTCCATTACTCCCGCCACCGCAACACCCTCTCCCTCGCCGCACTCCGCCGTGGCGCCACCAAGGATGCGCGCGCCTGGATGAGCGCCTCCCTCGGCTACCAGTACGGCTGCTGGAACGGCCTCAAGTACATCAACCACACGGCGCTCGTCGCCCAAACGATAACGTTCCTTGACTCTCTCGTCATCATTTCCAGCAACGCTCTCAGCATGATGGTCTCCTACGACCTCTTCGGAAACGACACCGCATCCTGGAGGCCGCCGATCACCGAGCGCGACGGCTTCTGGGAACCGTCCGGGACTCAGGGATTCGGGACGGGACCCAAGATACCGGAGAAATTGGAGAAATCGACGGCGAACGCTGTGGTGTGTAAGAGTGCGGGGTGTTACCAGACGGTGCAGGCAGCGGTTAGGGCTGCGCCGGATCGTGCGGAAGAGAGATTTGTGATATATATAAAGGAAGGGGTTTATGTGGAGAGGGTGAGGGTTCCGTTGAAGAAGAGGAATTTGGTGTTCTTGGGGGATGGCATCGGTAAGACGGTCATCACGGGATCTGCTAACGTCGGCCAGCTCGGCATCACCACCTACAACTCTGCCACCGTCGGGGTTGCTGGGGATGGATTTATGGCAAAGGATCTGACAATTCAGAACACGGCTGGTGCTGATGCTCACCAAGCAGTGGCCTTCAGATCAGACAGTGATCTTTCTGTGATTGAGAACTGTGAATTCATAGGCAACCAGGACACTCTCTATGCTCATTCCCTGCGCCAATTTTATAAATCTTGCCGCATACAAGGCAACGTGGACTTCATCTTTGGGAACTCGGCATCAATCTTCCAAGACTGTGAAATCCTAGTCCAGCCTCGCCAAGGCAGACCAGAGAAGGGTGAGAGCAATGCTGTTACTGCACAAGGTAGGACAGACCCTGCTCAGTCAACAGGATTTGTTTTCCAGAACTGTACGGTTAATGGTACGGCAGAATACATGGCATTGTATTATAGCAGCCCTACAACTCACATAAACTATCTGGGGAGGCCTTGGAAGGAGTATTCTAGAACACTTTTCATCCATACATTCATGGAATCCCTTATCACACCACAGGGATGGATGCCATGGACCGGGGATTTTGCTTTGAATACGCTTTATTATGGGGAATTTGAGAACTCAGGACCGGGTTCTAATCTGAGTCAGAGGGTGCCCTGGAGTAACCAGATCCCATCGGAGCACGTGTTCTCATATTCGGTGCAGAGTTTCATTCAAGGAAATGATTGGGATCATGTTGTCGTCAGTCATTAG 1665 0.5375 MRKPTKPPPTFHPFSILRSTLLLLLLSMASIFFLSLFFFLNLQPHSSAAVEINRACNATRYPLQCHTSLIPKLLTNPTPLQIIQSTIRASTSNLVTARSMLHSVRDASRSNRTRTTNVKSCLQVLHYSRHRNTLSLAALRRGATKDARAWMSASLGYQYGCWNGLKYINHTALVAQTITFLDSLVIISSNALSMMVSYDLFGNDTASWRPPITERDGFWEPSGTQGFGTGPKIPEKLEKSTANAVVCKSAGCYQTVQAAVRAAPDRAEERFVIYIKEGVYVERVRVPLKKRNLVFLGDGIGKTVITGSANVGQLGITTYNSATVGVAGDGFMAKDLTIQNTAGADAHQAVAFRSDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRIQGNVDFIFGNSASIFQDCEILVQPRQGRPEKGESNAVTAQGRTDPAQSTGFVFQNCTVNGTAEYMALYYSSPTTHINYLGRPWKEYSRTLFIHTFMESLITPQGWMPWTGDFALNTLYYGEFENSGPGSNLSQRVPWSNQIPSEHVFSYSVQSFIQGNDWDHVVVSH 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01812 554 Pfam Plant invertase/pectin methylesterase inhibitor 52 194 IPR006501 GO:0004857
Viun9g01812 554 Pfam Pectinesterase 244 545 IPR000070 GO:0030599|GO:0042545
Viun9g01812 554 CDD PMEI-like_3 55 195 - -
Viun9g01812 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 197 IPR035513 -
Viun9g01812 554 PANTHER PECTINESTERASE 34 547 - -
Viun9g01812 554 FunFam Probable pectinesterase/pectinesterase inhibitor 51 50 197 - -
Viun9g01812 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 194 IPR035513 -
Viun9g01812 554 NCBIfam pectinesterase inhibitor domain 28 194 IPR006501 GO:0004857
Viun9g01812 554 Gene3D - 238 553 IPR012334 -
Viun9g01812 554 FunFam Pectinesterase 237 553 - -
Viun9g01812 554 SUPERFAMILY Pectin lyase-like 242 549 IPR011050 -
Viun9g01812 554 SMART PMEI_2 47 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01812 Viun-Chr9 27694838 27697544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01812 42 547 Carbohydrate Esterase AT5G09760 62.403 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01812 - - gmx:100802102 864.374