Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01791 ATGAATCGGTCGACGGAGGCTGGGTACTGGAAGACTACTGGGAAGGATAGAGCGGTTGAACACAAGAATCGAGTTGTGGGGATGATTAAAACTCTGGTTTTTCACACAGGTAGAGCCCCTAAGGGAAATCGAACTGATTGGGTTATGCATGAATTCAGGCTCGATGACAAGGAGATGGTTGACGAAGGCATTTCGCAGCTAATCTACAAGGATACAGTGCCTTCTATGGAATTCAAACTCAATCATGAGAAACAATTTTCTCAAGCTCCCAAAATCATAAAGGACTCCTATGTAATTTGTAGGATATTCCAAAAAGAAGGTCCTGGTCCTAGGAATGGTGCACAATATGGTAAACCATATGATGAGAAAGAGTGGGATACAGATGAGGAAATTGACTCTGTGGAATCTGACCGTGTTGCTTCTGTGTCTACACCTGTTCCCATACAATCCAGTGAAATTCATATTTCTATTGCAAAAGACATCCATCCCTCTACAAGTGGATGTGCTGGATTGACCTCTGTATCATGTGTATCAGAATTGATGCCTTCTTGCACAGAACATCATGCGATTCCTAACAACAATCAAGTTGTCTCTGTATCATGTGTATCAGAATTGATGCCCTCTTGCTCAGCAATACCTTCTTCTCCTAACGATGCGTTGGGTTCTGTATCACATCTATCAAAATTGGCACCCTCTTGTTCAGCAGTTCCTTTTGCTCCAAACGATGATGTTGACTCTGTATCATGTGTATCAAAATTGATGCCCTCTAGCTCAGCAGTTTCTTTTGGTTCAAACAATGAAGTTGACTCTATATCGTGTGTTTCAAAATTGATGCTCTCTTGCTTGCCACTTGCTTTGGCTCCAAACAATGTAGTTGAGGCATCATCATCTGTACCAGAATTGATGCCCTCTTGCACGACACTTCCTTCAGCTTCATGTCCAAACCATCAAGATGATGATAACGTTTTATCTTCGCTAGATTATTTGAAAGAAGATGATGGCACAATGGCTGTGAATGCAAACAATGGAATTGAGAAGGTTGATCCTGATCAGGCGAGCAATGCTGAATGCGCACCATGTTTGGATCTAAATGTGATTTTTGAGAACTTAGGAGACCTTGACAGCTGGGTTGGATTGGGTGAAGGAAGTTTATCCTCTGGCCAGAAAAATGGACTTTCTACAAGCGATATGTTTTATACAGGTGTTGATGATATCTTCAGGTCTTGGGAATCCCAGGACTTTTTGGAGTTGATGGACCTAGCGGGGCCACAGCCCTGGCAGAATAAGCATGGAAGTTCTGGCGAAGATAACAAGTGA 1317 0.4244 MNRSTEAGYWKTTGKDRAVEHKNRVVGMIKTLVFHTGRAPKGNRTDWVMHEFRLDDKEMVDEGISQLIYKDTVPSMEFKLNHEKQFSQAPKIIKDSYVICRIFQKEGPGPRNGAQYGKPYDEKEWDTDEEIDSVESDRVASVSTPVPIQSSEIHISIAKDIHPSTSGCAGLTSVSCVSELMPSCTEHHAIPNNNQVVSVSCVSELMPSCSAIPSSPNDALGSVSHLSKLAPSCSAVPFAPNDDVDSVSCVSKLMPSSSAVSFGSNNEVDSISCVSKLMLSCLPLALAPNNVVEASSSVPELMPSCTTLPSASCPNHQDDDNVLSSLDYLKEDDGTMAVNANNGIEKVDPDQASNAECAPCLDLNVIFENLGDLDSWVGLGEGSLSSGQKNGLSTSDMFYTGVDDIFRSWESQDFLELMDLAGPQPWQNKHGSSGEDNK 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01791 438 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 187 - -
Viun9g01791 438 Pfam No apical meristem (NAM) protein 2 54 IPR003441 GO:0003677|GO:0006355
Viun9g01791 438 ProSiteProfiles NAC domain profile. 1 105 IPR003441 GO:0003677|GO:0006355
Viun9g01791 438 Gene3D NAC domain 1 107 IPR036093 GO:0003677|GO:0006355
Viun9g01791 438 SUPERFAMILY NAC domain 2 105 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01791 Viun-Chr9 27465669 27470240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01791 2 185 NAC Transcription Factor Family AT5G09330 41.799 9.52e-40 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun9g01791 NAM 3.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01791 - - vun:114164401 889.412