Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01783 ATGAATTTCCCTTATCTTACTAGCATCTCCGAACGTGTTGTTGCTCCTCTTCATGCCACAGTTCCCAGTACAATTATCAGGGGCAATAAGGCGGAGAGTTTTGCAATAGAAGGGCGTAATCTGAGATTCTCATTCACGACAAGGCAAACGCAGGATGTACCTGTTCTTAGGGATTGTTCGATTCGCATTCCTTGCGGCCAGTTTTGGATGCTTCTTGGACCCAATGGGTGTGGAAAATCTACCCTCTTGAAGATTTTGGCTGGTCTCTTGACCCCAACTTCAGGAACAGTGAATGTGAATGGACCTAAAAGTTTCGTTTTCCAAAATCCAGATCATCAGGTGGTGCTGCCTACTGTAGATGCTGATGTTGCATTTGGTCTTGGTAAGATCGATTTGACTCACGATGAAGTCAGGTCGAGGGTGTCGAGAGCTTTGCATGCTGTAGGCCTGTCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTCTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACCACATTCTTAGATGAAACTGACCAGGTCGGGGTTATCAAAGCTGTCAGGACTCTGTGGATACCTCTGCAGAAGTTACGGCATTATGGGTCACCCATCGTTTGGAAGAACTAG 675 0.4667 MNFPYLTSISERVVAPLHATVPSTIIRGNKAESFAIEGRNLRFSFTTRQTQDVPVLRDCSIRIPCGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVNVNGPKSFVFQNPDHQVVLPTVDADVAFGLGKIDLTHDEVRSRVSRALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRTLWIPLQKLRHYGSPIVWKN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01783 224 Pfam ABC transporter 56 188 IPR003439 GO:0005524
Viun9g01783 224 CDD ABC_cobalt_CbiO_domain1 37 206 IPR015856 GO:0005524|GO:0016020|GO:0055085
Viun9g01783 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 206 IPR027417 -
Viun9g01783 224 SMART AAA_5 65 221 IPR003593 GO:0016887
Viun9g01783 224 Gene3D - 31 212 IPR027417 -
Viun9g01783 224 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 223 IPR003439 GO:0005524
Viun9g01783 224 ProSitePatterns ABC transporters family signature. 161 175 IPR017871 GO:0005524|GO:0016887
Viun9g01783 224 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 36 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01783 Viun-Chr9 27315393 27318591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01783 36 208 Calmodulin-binding Proteins AT2G36910 30.570 8.33e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01783 - - vra:106780648 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01783 9 27315393 27318591 Viun9g01783 9 27315393 27318591 ECH