Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01738 ATGAAGGGAGAATTAGAGTTGCCACCAGGGTTCAGGTTTCACCCCACGGATGATGAATTGGTGAACCACTATCTGTGTAGGAAATGCGCTGGTCAACCAATTGCTGTTCCTATCATCAGAGAGGTCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAAATTGGATTTTACGGCGAGAAAGAATGGTACTTTTTTTCTCCTCGGGACCGCAAATACCCAAACGGCTCACGGCCGAACCGGGCCGCCGGAAGTGGGTATTGGAAGGCCACCGGCGCCGATAAACCGATCGGAAAGCCGAAGGCGCTTGGGATAAAGAAAGCTCTGGTTTTTTACTCGGGAAAAGCCCCCAAAGGAGAGAAAACCAATTGGATCATGCACGAATATCGGCTGGCCAATGTTGACCGATCAGCCTCCAAGAAAAACAACAACCTGAGGCTTGACGATTGGGTGTTGTGTCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAACACGGGGGCACCGAAATCGGAGGCTGGGGTGGTTTATAATTTTGAGCACGAGACGAAGCCGGTGATTGAGAAGCTTAGGAATGAGCAATTGTTTATGGAGAGTTCAGATTCGATGCAGAGGTTGCAGAGTGAGTCGAGTGGTTCAGAGCAGGTGGTTTCGCCGGACGTGAGGTGGGAGAGAGAGGTGCAGAGCCACCAGAAATGGAATGACATAAGCCTACAGCTAGAAAACGCGTTTGATTTTGGATACAACTACTTTGACAACAATAATAACCTTTCGGTGGATGACCCTTTTGGGAGTGTTGAGTACCAAATGCAGGACGTGCTGTTGGAAGCCCTATTGATGTGA 846 0.4835 MKGELELPPGFRFHPTDDELVNHYLCRKCAGQPIAVPIIREVDLYKFDPWQLPEIGFYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYSGKAPKGEKTNWIMHEYRLANVDRSASKKNNNLRLDDWVLCRIYNKKGKIEKYNTGAPKSEAGVVYNFEHETKPVIEKLRNEQLFMESSDSMQRLQSESSGSEQVVSPDVRWEREVQSHQKWNDISLQLENAFDFGYNYFDNNNNLSVDDPFGSVEYQMQDVLLEALLM 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01738 281 PANTHER NAC TRANSCRIPTION FACTOR 56 7 203 - -
Viun9g01738 281 SUPERFAMILY NAC domain 3 158 IPR036093 GO:0003677|GO:0006355
Viun9g01738 281 ProSiteProfiles NAC domain profile. 7 158 IPR003441 GO:0003677|GO:0006355
Viun9g01738 281 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Viun9g01738 281 Gene3D NAC domain 16 163 IPR036093 GO:0003677|GO:0006355
Viun9g01738 281 FunFam NAC transcription factor 16 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01738 Viun-Chr9 26453765 26455332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01738 1 281 NAC Transcription Factor Family AT1G01720 60.884 1.98e-118 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun9g01738 NAM 4.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01738 - - gmx:100814504 459.529