Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01701 ATGTCTGGGAAGGCGAAGAGGAGAGACGAAGACGGTGCTTCCGACGCCGACTCTGAAGGCCACGCGCCGCCCAAAAAGACCTTCAAGAAGGATTCCGACGAGGAATCCGACTCTATTGTCGTCTGCGAGATTTCTAAGAACAGGAGGGTTTCTGTGAGGAACTGGCAAGGCAAGGTTGTGGTTGACATTCGCGAGTTTTACTCCAAGGATGGCAAACAATTGCCTGGCAAGAAAGGTATCTCGTTGACCATGGATCAGTGGAATGTGCTTCGCACTCATGTTGAAGAAATTGACAAAGCAGTCAGTGAAAATTCTTAG 318 0.4937 MSGKAKRRDEDGASDADSEGHAPPKKTFKKDSDEESDSIVVCEISKNRRVSVRNWQGKVVVDIREFYSKDGKQLPGKKGISLTMDQWNVLRTHVEEIDKAVSENS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01701 105 MobiDBLite consensus disorder prediction 1 37 - -
Viun9g01701 105 Pfam Transcriptional Coactivator p15 (PC4) 42 92 IPR003173 GO:0003677|GO:0006355
Viun9g01701 105 FunFam Putative transcriptional co-activator 32 105 - -
Viun9g01701 105 Gene3D Transcriptional Coactivator Pc4; Chain A 29 105 IPR009044 GO:0003677|GO:0006355
Viun9g01701 105 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 19 104 IPR045125 GO:0003713|GO:0060261
Viun9g01701 105 SUPERFAMILY ssDNA-binding transcriptional regulator domain 41 102 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01701 Viun-Chr9 25862232 25864705 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Viun9g01701 PC4 7.1e-26 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01701 K25815 - gmx:100499936 186.422