Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01695 ATGAAGTTAATCGGCGACGGAGCCGATGGCCGGAAAGTGCTCGTCGGAGTAAAATTGGATCCTTCCAGCCGCGAATTGCTGACGTGGGCGCTCGTCAAAGTGGCTGAGCCCGGGGACATCGTCATTGCGCTTCACGTCCTCGACTCAATCACTGAGGGAACGGCATCGCTGTTATCTCTCGTGAAGACTTTCGACTCCGTTCTCGCCGTTTATGAAGGCTTCTGCAACCTAAAACAGGTTGGTCTGAGGCTTAAAGTGTGTCGCGGTGACTCGGTTCGGAAGGTTCTGGTTCAGGAGGCTAAGACGTTTGGCGTTTCCACGGTGATTTTGGGAACTTCCAAGTCTCATCACACTATTCGCTCTTCCGCGTGGGTTGCGAAGTACTGTGCGAAGAAATTGCCCAAGTGTATCTCTGTTTTCTCTGTAGATAATGGCAAAATTGCTTTCCGAAGAGAAGCTAATTGTGGCGATCGAGAAAAATCACCCGAAGGGTCAAGTTTGTCGCCAAGGTCGTTGGCGGTTTATGCCAAGAAGAATATGAAGAGTTGCGAAAGTTGTGCATTGCAAGAGATTCCTGGGACTGGGTTTGAGCGAGAGTTGTGTGATGATTTTGAGAAGGGTGATTCGCTTGCTCTGGTCCCGTTTAAGAAACATGATGATGGTCCTTGTTTTTCAGTTGTGGTGGATAATTCGAAGCGTAAACCTGGCTGGTCACTGCTTCGCAATGTGTTTCATCACAAGAAGCATTCCCCAAAATCTTCCACGAAAAATACATATATTTTTCAACGGGCGTTGCGGCAGTCGAGTTTTCATTCTTCTGCTGTAGTCCATCCAGATCATAAACAAATTGGTATTGAGCAGATTGATGATTCCCCTCTTGATGGGGTGAGTGGTGCCATTGTGCCATTTGGATCTGCTACTATTTTTACTCGGCCCTCCATTAGCTATGAGTCGGGTAACCTACCTGAAGAATTGTTGATATTACAAGAAAAGTACTCATCTTCGTGCACTTTACATAGTTTGCAGGAGCTTGTATCTGCAACCTCCAACTTCGCACCAGAGAATTTGGTTGGCAAAGGTGGTTGTAGTTATGTTTACAGAGGATGTCTTCCAGATGCCAAGGAATTGGCCGTGAAAATTTTGAAGCCCTCTGAGAACGTGGTAAAGGAGTTTGTTCAGGAAATTGAGATCATTACGACTTTGTGCCACAAGAACATAATATCTATATCTGGCTTTTGTTTAGAGGGCAACCATTTGCTACTAGTATATGATTTTTTGTCAAGGGGAAGCCTAGAAGAAAACCTCCATGGCAACAAGGCGGACTGTAGTGCATTTGGTTGGCAAGAGAGGTACAAGGTGGCTGTGGGTGTAGCTGAGGCACTGGATTATCTGCATAATGGCTGTGCTCAGGCCGTTATCCATAGGGATGTGAAATCTTCTAATATCCTTCTTTCAGATGATTTTGAGCCTAAGCTTTCAGATTTTGGACTGGCTAGTTGGGGTTCATCTTCTTCCCATGTTACTTGTACCGATGTAGCTGGAACTTTTGGATACCTGGCACCTGAGTATTTTATGCACGGTAAAGTGACAGATAAAATTGATGTATATGCTTTTGGTGTTGTACTCCTGGAGCTTCTCTCAAATAGGAGGCCCATTAACAATGAATGTCCAAAGGGCCAGGAGAGCCTTGTTATGTGGGCAACACCAATATTGAAAGGTGGGAAGTTTCACCAGTTGTTTGATCCAAACCTAGGCATTGAATACGATGATGGGCAGATGAAGAGAATGGTTTTGGCTGCTAGTCTCTGCATTAGACGGGAACCTAGGCTGCGGCCTCAAATCAGCCTTATATTGAAACTTCTTCGTGGTGATGAAGAAGTCACAAGATGGGCAGAAGAAGAAGTTAATTCACCGCAGGAAGTTGATGGTTTTGAGGAGGAACCAATTCCAACTAACATACAGTCCCACCTGAACCTTGCTTTGATGGACTTGGAGGATGATACGCTTTCTATAAGTAGCACTGATCAGAGTATCTCTTTGGAGGAGTATTTGCAGGGAAGATGGAGTCGCTGTTCGAGTTTTGACTGA 2088 0.4535 MKLIGDGADGRKVLVGVKLDPSSRELLTWALVKVAEPGDIVIALHVLDSITEGTASLLSLVKTFDSVLAVYEGFCNLKQVGLRLKVCRGDSVRKVLVQEAKTFGVSTVILGTSKSHHTIRSSAWVAKYCAKKLPKCISVFSVDNGKIAFRREANCGDREKSPEGSSLSPRSLAVYAKKNMKSCESCALQEIPGTGFERELCDDFEKGDSLALVPFKKHDDGPCFSVVVDNSKRKPGWSLLRNVFHHKKHSPKSSTKNTYIFQRALRQSSFHSSAVVHPDHKQIGIEQIDDSPLDGVSGAIVPFGSATIFTRPSISYESGNLPEELLILQEKYSSSCTLHSLQELVSATSNFAPENLVGKGGCSYVYRGCLPDAKELAVKILKPSENVVKEFVQEIEIITTLCHKNIISISGFCLEGNHLLLVYDFLSRGSLEENLHGNKADCSAFGWQERYKVAVGVAEALDYLHNGCAQAVIHRDVKSSNILLSDDFEPKLSDFGLASWGSSSSHVTCTDVAGTFGYLAPEYFMHGKVTDKIDVYAFGVVLLELLSNRRPINNECPKGQESLVMWATPILKGGKFHQLFDPNLGIEYDDGQMKRMVLAASLCIRREPRLRPQISLILKLLRGDEEVTRWAEEEVNSPQEVDGFEEEPIPTNIQSHLNLALMDLEDDTLSISSTDQSISLEEYLQGRWSRCSSFD 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01695 695 Pfam Universal stress protein family 11 134 IPR006016 -
Viun9g01695 695 FunFam Putative receptor-like serine/threonine-protein kinase 426 637 - -
Viun9g01695 695 PANTHER OS08G0249100 PROTEIN 120 646 IPR046958 -
Viun9g01695 695 Pfam Protein kinase domain 354 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01695 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Viun9g01695 695 CDD USP_Like 12 137 - -
Viun9g01695 695 Gene3D Transferase(Phosphotransferase) domain 1 426 642 - -
Viun9g01695 695 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 10 143 - -
Viun9g01695 695 SUPERFAMILY Protein kinase-like (PK-like) 332 629 IPR011009 -
Viun9g01695 695 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 320 425 - -
Viun9g01695 695 SMART serkin_6 351 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01695 695 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 115 - -
Viun9g01695 695 Gene3D HUPs 10 141 IPR014729 -
Viun9g01695 695 ProSiteProfiles Protein kinase domain profile. 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01695 695 Gene3D Phosphorylase Kinase; domain 1 320 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01695 Viun-Chr9 25705744 25709269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01695 334 622 Trihelix Transcription Factor Family AT1G68690 44.850 6.73e-75 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Viun9g01695 Pkinase 6.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01695 - - gmx:100815722 1193.33