Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01680 ATGGAAGATGCAAGTTTCAACCTTCCTCCTGGCTTTTTCTTCTCCCCAACTGATGAAGAACTTGTTCTTCACTTTCTCTACTGCAAGACTTCTCTTATTCCATGCCATCCCAACATCATTCCAGACCTCGATTCTCGCCTCCATCCCTGGGAACTAAATGGCTTTGTTTTAAGTGGGAATCAGTACTATTTCTTCACCAAAGTGAATGAAAACAGAACAATGGAAAATGGGTGTTGGAAGGAAATAGGTGTGACGGAACCTATATTTTCAACTTTTGACAAGAAAGTGGGAACGAAGAAGTACTTGGTATTCCACATTGGTGAAGATCCACATGTTACTGAAACCAACTGGGTAATGCAAGAATATCATATATGTTCTTCTGGGTTTGACACTGCGTCCTGTAGAAGTTCTAGGAGAAGACGAAAACATGATCAAAGTTGGAGCAAGTGGGTTTTGTGCAGAGTGTACGAGAAGATGAGGTCTGAAGAAGGTGTAAAATTCTATAGCGATGATGATGAGAGTGGATCAGAGCTTTCATGGTTGGATGAAGTTTATCTGTCGTTGGATGATGATCTCGAAGAAATTGGCATGCCTAATTAG 600 0.41 MEDASFNLPPGFFFSPTDEELVLHFLYCKTSLIPCHPNIIPDLDSRLHPWELNGFVLSGNQYYFFTKVNENRTMENGCWKEIGVTEPIFSTFDKKVGTKKYLVFHIGEDPHVTETNWVMQEYHICSSGFDTASCRSSRRRRKHDQSWSKWVLCRVYEKMRSEEGVKFYSDDDESGSELSWLDEVYLSLDDDLEEIGMPN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01680 199 Pfam No apical meristem (NAM) protein 9 124 IPR003441 GO:0003677|GO:0006355
Viun9g01680 199 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Viun9g01680 199 PANTHER NAC TRANSCRIPTION FACTOR 56 8 165 - -
Viun9g01680 199 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Viun9g01680 199 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01680 Viun-Chr9 25352552 25353640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01680 7 163 NAC Transcription Factor Family AT1G61110 38.690 3.24e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Viun9g01680 NAM 2.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01680 - - gmx:100170711 353.599