Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01665 ATGCCGCTTTTAAGGAGAAAGCCTTTTGCCCTTGTTGAGCCACCGATTGATTTGGAGCCAAGCGAGAGTCTTTTTCAAATTCGATTTACTAAAGAAGTATTTCGAGATTATAATGATTATTTAAACCGCTTAAATCAATACCGCAAGAGGGTTTGGACGTGCAAAGTAACGGGAAAAACTGGCTTAACTTATGAAGAGGCTTTGGTGTCAGAGAAGCATGGTGCTGAGAAAGTTCAACAGATTCCGGAAGAATTAATAGCACCGGCACTTAGGATTATTCAGTACAGCATGCTCCCTTTGAAGGACCTTGTTGATTATATTGCTGATAAGTTGAAGGAGCAGTTGGTTGTGGGCTCTCAATTGTACGGAAAAAAGAATGAAAGAGTGTGTCCTTGCAAAATATTGAAAGTGATGCAGGAAGATGCTGAAAATGTCAGCTATGTGGTGGCTTGGCTAGATGGAAGCAATAATGTTATTGAAAGAGCAGAAGTCAGTTCTCAAGATTTGGTGCAGAAGAAGTCACCTTTTAGTAGAAATATTTTGAAGTCTTTTGTCCGTGAATGTACATATCGAAATGCTCCTTGGGTTTTACACGATAAACTTGCAAAAAAACATGAAATCTCAACTGACATTCCAGAGGAGTTAAGAGGAAAGGTTTCCTTTAACAATGGACTCGTGGTATTCACCAAAAAAAGAAAGCATGGGGAAGAGTTAATCAAATATCCAATTGATGATCTATTAGTGAAGCCTAGTCCAGATGATCCAGTTTTCAGTAGTCGTCCTTCTCCATCAAGAGACTTTAATATTCCAATTCATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTTTATGTCTTTTGGTAAACTTTTACAATTGTCTCCGTACACTCTCAAAGATTTTGAAAAGGCAATCAGTCACAAGGATAGCAATGTTGCTCTCCTGGTGGAATCTCATGCAGTACTCTTCCGTGTGCTCATCAAAGGTGACGATGAATACTATGCAGCTGTTCATGATAAATTACCGAAAAAGATTACAATGATTAGTTGGAAAGACTATTTATGCGAGTTTTTAGAAATGATCAAGATTCCCAAGCTGCGGCAGTATGAAGCAACAATTAAACGGGGACGTTATAGTTATGTAGATGTGAATGCTAAATTAGAAATCTTTCGGGAATTAGTCAATCGAGCCCTTGATACAACTATTGTCAGGGAAAAATTGCATGAGTTTATTGAACAAAGGCGGGCACTAGGGGCTGCTAAAAGGGAAGAAGCAATTGAAGCTTCTGCAAAGAGAAGAAAAGTAAAGGAGCAGTTGAAAGCTGATTCTGGAAGCAACTGTAGTGAGAATGGGCATGATCTTGATCAGGATGCAAATGTGTCAGCAGATAATAATCACAGAATACAGAATGGTAGTATTAGAAAGAATAGAAACAGTAAGATAGAATCATCTAGGCAAAAAGATGCATTGGATAGTGGTATCAAGCATTCAAACCTTGCTTCAAAAATGTCAGCTGAAAAGTTTGATTCTGAGCTGAATCGATCTGCAGAATTCGGAAAAGTGTACAACAGAAAGGAATCACAGAAGCAACCAATGGGCGATAAGGATCAATCAGAAGACAGCTACGAACAAAGGAGACAATATTTTGATCGGGAGATAGAGAAATGGTGTGTTCGTACAAGTTTCCTAGGTATGGACAGATATTATAATAGGTATTGGTGGTTTTACCGTGATGGAAGGATATTTGTTGAAAGTCCTGAATCCAATGAGTGGGGATACTACAGTAGCAAAGGAGAGCTTGATGGATTGACGAGTTCACTGAATTGCAAAGGCGAGAGGGAAAAGGCACTTCTAAAACAACTGAAAAAATATTATGGTAGAATATGCTTAGAATTGCAGAAAAATTCAAAGGATTTGTTGCATAAGATTACCCGGGATGATTCTGTGGTCAGAAGGTCTACCCGTGTTCGCGCACCACCTAGGAAAAATCCTGCCAAAGCTTTCCTTAGATATGTAAACAAGTGGAAAGAAGAGTAA 2037 0.3873 MPLLRRKPFALVEPPIDLEPSESLFQIRFTKEVFRDYNDYLNRLNQYRKRVWTCKVTGKTGLTYEEALVSEKHGAEKVQQIPEELIAPALRIIQYSMLPLKDLVDYIADKLKEQLVVGSQLYGKKNERVCPCKILKVMQEDAENVSYVVAWLDGSNNVIERAEVSSQDLVQKKSPFSRNILKSFVRECTYRNAPWVLHDKLAKKHEISTDIPEELRGKVSFNNGLVVFTKKRKHGEELIKYPIDDLLVKPSPDDPVFSSRPSPSRDFNIPIHCVGDLLMVWDFFMSFGKLLQLSPYTLKDFEKAISHKDSNVALLVESHAVLFRVLIKGDDEYYAAVHDKLPKKITMISWKDYLCEFLEMIKIPKLRQYEATIKRGRYSYVDVNAKLEIFRELVNRALDTTIVREKLHEFIEQRRALGAAKREEAIEASAKRRKVKEQLKADSGSNCSENGHDLDQDANVSADNNHRIQNGSIRKNRNSKIESSRQKDALDSGIKHSNLASKMSAEKFDSELNRSAEFGKVYNRKESQKQPMGDKDQSEDSYEQRRQYFDREIEKWCVRTSFLGMDRYYNRYWWFYRDGRIFVESPESNEWGYYSSKGELDGLTSSLNCKGEREKALLKQLKKYYGRICLELQKNSKDLLHKITRDDSVVRRSTRVRAPPRKNPAKAFLRYVNKWKEE 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01665 678 MobiDBLite consensus disorder prediction 430 496 - -
Viun9g01665 678 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 233 676 - -
Viun9g01665 678 SMART testlast3 271 332 IPR018501 -
Viun9g01665 678 MobiDBLite consensus disorder prediction 441 477 - -
Viun9g01665 678 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 558 624 IPR028941 -
Viun9g01665 678 MobiDBLite consensus disorder prediction 519 543 - -
Viun9g01665 678 Pfam DDT domain 272 328 IPR018501 -
Viun9g01665 678 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Viun9g01665 678 ProSiteProfiles DDT domain profile. 271 332 IPR018501 -
Viun9g01665 678 ProSiteProfiles WAC domain profile. 22 127 IPR013136 -
Viun9g01665 678 MobiDBLite consensus disorder prediction 478 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01665 Viun-Chr9 25132958 25138587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01665 273 328 Homeobox Transcription Factor Family AT1G28420 46.429 4.96e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Viun9g01665 WAC_Acf1_DNA_bd 8.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01665 - - gmx:100784607 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01665 9 25132958 25138587 Viun9g01665 9 25132958 25138587 ECH
Viun3g00762 3 4695916 4702365 Viun9g01665 9 25132958 25138587 PCT