Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01656 ATGAGGAAATCATGTGGCTTTTTCTTCTTGCTCCTTCTTCTGGTCTTTGCTTCCCAGGTGGTGGTGCAGACGGAGGGAAGAGTGTGCGAGTCACAGAGCCACGGGTTCAAGGGTGCATGTACCGGAGACCATAACTGTGCTCTGGTATGCAGGAACGAAGGCTTCTCCGGTGGCAACTGCAGAGGCTTCCGCCGCCGATGCTTCTGTACCAAGATTTGCTGA 222 0.5405 MRKSCGFFFLLLLLVFASQVVVQTEGRVCESQSHGFKGACTGDHNCALVCRNEGFSGGNCRGFRRRCFCTKIC 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01656 73 Gene3D - 27 73 IPR036574 -
Viun9g01656 73 Pfam Gamma-thionin family 27 73 - -
Viun9g01656 73 PRINTS Purothionin signature 28 43 IPR008176 GO:0006952
Viun9g01656 73 PRINTS Purothionin signature 58 72 IPR008176 GO:0006952
Viun9g01656 73 SMART gth_4 28 73 IPR003614 GO:0006952
Viun9g01656 73 ProSitePatterns Gamma-thionins family signature. 27 50 IPR008176 GO:0006952
Viun9g01656 73 SUPERFAMILY Scorpion toxin-like 27 73 IPR036574 -
Viun9g01656 73 PANTHER DEFENSIN-LIKE PROTEIN 1 1 73 - -
Viun9g01656 73 CDD Knot1 38 70 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01656 Viun-Chr9 24967860 24968441 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01656 9 73 Plant Defensins Gene Families AT5G63660 63.077 1.72e-27 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01656 - - gmx:547938 115.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01656 9 24967860 24968441 Viun9g01656 9 24967860 24968441 ECH