Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01641 ATGGAATCGTGGGGTGCTCATCATCGAGTGATGTTCGTTAGTCAGCATGAGGAGGATGGAACTCCTTCTGATACTTCCAAGGGAGAGGAATCAAACGATGAAGAAGAAAAAATCATGAAAGCTGAACCTTCCTTTGTGCCAGAAATTAAGAAAAGGAAACGCCTTAGCCTTAGTCAGCTTAAAGAGGTAAAAGGAGAATCATGTGGGAAGCAAAACAGTAGCAAGCTTAAAAAGAAGAAGAATGAAAGTAGGGATAGATGGTCAGCTGAGAGGTATCAGTTGGCTGAGCATAACATGTGGGAGGTACTAAAGACTGAAGGGGCAACATTTGAAAACCCAATAACCCGACCTGCACTAAGATTGGCTGCTCGCAAACACATTGGTGATACCGGACTTTTAGACCACTTACTGAAACACATTGACGGTAAAGTGGCACCTGGAGGTACCGAGCGATTCCGAAGATGGTTCAACACCAATGGAATCATGGAGTATTGGTTAGAGAGTGCTGACTTGGACAAGGTGCGCCAGGAGGCTGGTGTGCAGGACCCTTACTGGATACCACCATCTACATATAGGGCAGGCGGTGCACCCTCTCAGAATACTGATACTTCTGGTGAATTGAAACAGCTTAAAATAGAATTGGCGCAAATGAAGAAAGATATGCATGAGCTCATTTCCATGAAGGAAGAAAAAAAGGGTATTAATACGATGGAGGAGAACTACAAGGATTTTGTTAAGTGGAAAGCTATGACTGACCATCGCCTTACTGAAATCATTAATTCTTTGAAGGGTGTGCAGGGGAAGTATGGTGAATTGATGATTTGGAAAACTAAAGTTGAGCAACAACTTGCGGAAATAACCAATAAATTGAATGATCTTCAAGCATCTAGGGAGTGCACCACTTTTAGTCCTCCTTCAGAAAGGTGGAAAGATTGGATAGAAAGCACTAACCTAGACAATATTCAAGAAGATGCATTTGCAACTTGGATTGGGAATCCAGAACTACTTAATGTCCCACCAGAGGTTATACCTGAAGATTTCAACACAGCCATACCAACACAGCCACCCAATGAGGAGCTGACTAAGAAGAGCGATATGCTGGAGCTGGAACCTGTTAAACTAGAAGATCAACCCAATGTGACCCCCGATTCTTCTACAACTATTAATTCGAAGTCAGACCTTGACAACTCATTGATTATGTTTCAGGAAATGCTTATGGATTTATACAAATGGAAAGAAAAAATGGAACAGCAGCTGATGGAGGTGTCAAATACTGTATATGGTATGCTGGCAATGAAGTAG 1302 0.4224 MESWGAHHRVMFVSQHEEDGTPSDTSKGEESNDEEEKIMKAEPSFVPEIKKRKRLSLSQLKEVKGESCGKQNSSKLKKKKNESRDRWSAERYQLAEHNMWEVLKTEGATFENPITRPALRLAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTNGIMEYWLESADLDKVRQEAGVQDPYWIPPSTYRAGGAPSQNTDTSGELKQLKIELAQMKKDMHELISMKEEKKGINTMEENYKDFVKWKAMTDHRLTEIINSLKGVQGKYGELMIWKTKVEQQLAEITNKLNDLQASRECTTFSPPSERWKDWIESTNLDNIQEDAFATWIGNPELLNVPPEVIPEDFNTAIPTQPPNEELTKKSDMLELEPVKLEDQPNVTPDSSTTINSKSDLDNSLIMFQEMLMDLYKWKEKMEQQLMEVSNTVYGMLAMK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01641 433 Coils Coil 200 227 - -
Viun9g01641 433 MobiDBLite consensus disorder prediction 11 47 - -
Viun9g01641 433 Coils Coil 276 296 - -
Viun9g01641 433 MobiDBLite consensus disorder prediction 61 84 - -
Viun9g01641 433 MobiDBLite consensus disorder prediction 1 47 - -
Viun9g01641 433 PANTHER PROTEIN DYAD 1 431 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01641 Viun-Chr9 24564812 24568321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01641 86 167 PHD Transcription Factor Family AT5G22260 40.964 5.09e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01641 - - gmx:100806484 758.829