Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01598 ATGGATCCGGACGCATTCACCGCCAGCCTATTCAAGTGGGACCCACGCACCGTCCTCCCCGCCGCACCGCCCTCTCGGCCCCCGCCGCCGCTCCTGGACTATGCTGTCGCCCCGCCCGCCGTCGCCCCCTCTTACCACCCCGCGAGGGCGGCGCCCCGCGAGCTCGGCGGCCTCGAGGAGCTCTTCCAGGCCTACGGCATCCGTTACTACACGGCGGCCAAGATCGCCGAGCTCGGGTTCACGGTGAGCACGCTGGTGGACATGAAAGACGAGGAGCTCGACGACATGATGAACAGCCTCTCCCAGATTTTCCGCTGGGATCTCCTCGTGGGCGAACGCTACGGCATCAAAGCCGCCGTCAGAGCCGAACGACGTCGCATCGACGACGAGGACATCAAACGCCGCACTGGTAACCTCCTCTCCGCCGACACCACCACCACCAACGCCCTCGATGCTCTCTCTCAAGAAGGTTTGTCGGAGGAGCCAGTGGTGCAACGAGAGAAGGAGGCGGTGGGGAGCGGGGGAGGGAGCACGTGGGAGGTGGTTGCGGCGGAGGAGAGGAGGAAGCAGCAGAGGAGGCGGAGGACGAGGATGAAAGAGCAGGAGGAGAGGGAGGATGTGGAGGATGAAGAGGGAGAAGAGAACGAGGAGGGGAACAACAACAGTGGTGGAGGTTGTGAGAGGCAGAGGGAGCACCCATTCATCGTGACGGAGCCTGGGGAGGTTGCACGTGGGAAGAAGAATGGGTTGGACTATCTGTTTCACCTCTACGAGCAGTGCCGGGAGTTCTTGATGCAGGTCCAGGCCATCGCGAAGGACCGCGGTGAAAAATGCCCCACCAAGGTGACAAATCAGGTGTTTAGGTACGCGAAGAAAGCTGGAGCGAGCTACATCAACAAGCCAAAGATGCGACACTACGTCCACTGCTACGCCTTGCACTGTCTGGACGAGGAGGTGTCGAACGAGCTTCGTAGGGCGTTCAAGGAGAGAGGAGAGAACGTTGGAGCCTGGAGACAAGCATGTTACAAGCCCCTTGTGGCCATCGCAGCGCGTCAAGGATGGGACATTGATGCCATATTCAATGCCCACCCTCGTCTTTCCATTTGGTACGTTCCCACCAAGCTCCGTCAGCTTTGTCACGCCGAGAGAAACAGCGCCGCCGCTTCCAGCTCCGTCTCTGTCGGCAGCGCTCACCTTCCCTTCTAG 1206 0.6111 MDPDAFTASLFKWDPRTVLPAAPPSRPPPPLLDYAVAPPAVAPSYHPARAAPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDDEDIKRRTGNLLSADTTTTNALDALSQEGLSEEPVVQREKEAVGSGGGSTWEVVAAEERRKQQRRRRTRMKEQEEREDVEDEEGEENEEGNNNSGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLMQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNSAAASSSVSVGSAHLPF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01598 401 MobiDBLite consensus disorder prediction 154 229 - -
Viun9g01598 401 PANTHER PROTEIN LEAFY 1 400 IPR002910 GO:0003677|GO:0006355
Viun9g01598 401 Coils Coil 181 217 - -
Viun9g01598 401 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 222 387 IPR035209 GO:0003677
Viun9g01598 401 Pfam Floricaula / Leafy protein SAM domain 54 130 IPR035079 -
Viun9g01598 401 Gene3D Protein LEAFY 224 393 IPR038276 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01598 1 396 Orphan Transcription Factor Family AT5G61850 65.700 2.26e-166 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Viun9g01598 C_LFY_FLO 4.8e-109 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01598 - - gsj:114416001 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01598 9 23768539 23770960 Viun9g01598 9 23768539 23770960 ECH