Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01575 ATGAAGTGGCCAACATGGAAGTACAGCACCATGGCAATGGGTGTGGTGTTCTTTTGTCTGAGTTTTTCCTCGGAGGTGTTCTGTGACCGTTCTCATGCAGACAGAATTGCTGAGCTTCCTGGCCAACCCTACGTAGGCTTTCAACAGTTCTCTGGGTATGTCACAGTGGATGAGAAGGAACACAAGTCTCTCTTTTACTATTTTGCTGAGTCAGAAACTGATCCAGCTTCAAAGCCTCTTGTTTTGTGGCTCAATGGAGGACCTGGTTGTTCTTCACTGGGAGTGGGTGCATTCTCAGAAAATGGACCTTTCAGACCAAATGGAGAATTTCTGATTAAAAATTATTATAGTTGGAACAAAGAGGCAAACATGCTGTATTTGGAGACACCAGTTGGAGTGGGGTTCTCTTACGCTAAAGGTAGCTCCTCATATATGACAGTGAATGACGAGGCAACAGCCAGGGACAATCTTGTATTCCTGCTACGCTGGTTCAACAAGTTCCCCCAATACAGGAGCAGAGATTTGTTTCTAACGGGGGAAAGCTATGCAGGTCATTATGTTCCTCAACTTGCGAAGCTCATGATTGAAATGAACATAAGGAAAAAGATATTCAATCTGAAAGGCATTGCGTTGGGTAATCCAGTTCTAGAATATGCCACTGACTTCAATTCAAGAGCTGAGTTCTTTTGGTCTCACGGACTGATATCAGATTCAACCTACAACATATTCACCACAGTGTGCAACTATTCTAGGTACGTGAGTGAGTACTATAGGGACTCAATTTCGCCTCTTTGTTCAAAGGTTATGGGTCAAGTGAGCAGAGAAACCAGTAAATTTGTGGACAAATATGATGTCACACTTGATGTTTGCATTTCCTCAGTGCTATCACAATCCAAGGTTATTTCTCCTAAAACCCAAGAAGCAAGTGAGAGCATAGACGTGTGTGTGGATGACAAGGTTACAAACTACTTAAACCGGAGAGATGTACAAGAAGCACTTCATGCAAAGCTCGTTGGAGTTCGCAAGTGGGATGTTTGCAGCAACGTGCTGAACTATGATATGCTCAACCTGGAAGTGCCTACACTACCTGTTGTTGGATCACTCATAAAAGCTGGAGTCAGGGTCTTAGTTTATAGTGGAGATCAAGATTCAGTAATTCCACTGACTGGAAGCCGTACCTTAGTTCAGAAGTTGGCAAGACAATTAGGACTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGTCAGCAGGTTGGTGGTTGGACTCAAGTTCATGGCAATATCCTCTCATTTGCGACTGTTAGAGGTGCCTCCCATGAAGTTCCTTTCTCACAACCTCAAAGATCACTTGTACTATTCAAGTCATTCTTGAGAGGCGTACCTTTACCTGAAGTCTTCTGA 1404 0.4338 MKWPTWKYSTMAMGVVFFCLSFSSEVFCDRSHADRIAELPGQPYVGFQQFSGYVTVDEKEHKSLFYYFAESETDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNYYSWNKEANMLYLETPVGVGFSYAKGSSSYMTVNDEATARDNLVFLLRWFNKFPQYRSRDLFLTGESYAGHYVPQLAKLMIEMNIRKKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNIFTTVCNYSRYVSEYYRDSISPLCSKVMGQVSRETSKFVDKYDVTLDVCISSVLSQSKVISPKTQEASESIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSNVLNYDMLNLEVPTLPVVGSLIKAGVRVLVYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVHGNILSFATVRGASHEVPFSQPQRSLVLFKSFLRGVPLPEVF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01575 467 FunFam Carboxypeptidase 29 464 - -
Viun9g01575 467 FunFam Carboxypeptidase 361 460 - -
Viun9g01575 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 430 447 IPR033124 GO:0004185
Viun9g01575 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Viun9g01575 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Viun9g01575 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Viun9g01575 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Viun9g01575 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 447 IPR001563 GO:0004185|GO:0006508
Viun9g01575 467 Gene3D - 361 460 - -
Viun9g01575 467 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Viun9g01575 467 Pfam Serine carboxypeptidase 41 460 IPR001563 GO:0004185|GO:0006508
Viun9g01575 467 Gene3D - 315 351 - -
Viun9g01575 467 Gene3D alpha/beta hydrolase 31 292 IPR029058 -
Viun9g01575 467 SUPERFAMILY alpha/beta-Hydrolases 38 464 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01575 Viun-Chr9 22922863 22926473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01575 323 463 Calmodulin-binding Proteins AT2G22960 26.950 2.53e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01575 K16297 - gmx:100795668 879.011