Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01570 ATGTTGGACATTGAATCGAGTTCATTTTCTTGGGTCAGACTCTCTTCACTTCACCACACTGAACACACTAGCAGCAACGAACATTCTGAGGATGAAATGAACCGAGCTCTCGAGGTAACAGTAAATTCTGGAGGGGTAGTCTTCTTTGCCTTTTTCAACGGTTGTGACAGTGGTGATGGTTGTTCAAAAGAAGAAACAGCTGTTATAAAGATATCGTCTTCAAGAATGGCAACACAATCGGAATGTCTTGGTTATGAATTTGCCAAGTGGTTGGGCGTTCAAACTCCTCAGGCTAGAGTCATCCACAATACCAGTTTAGAGTGGATACAAATAAAGGAAGCTACAGAAAAAGCAAGAGATGCAGCAAGTTCTGCACGTGATGCAATTGGTGAACTGACATGCACAGAACTTCTGGAAGCACTTGATCTTAGTCGATGTCTCATGTTTATGAGTTATGTGCACGGTTCACCCTTGCTTGAAAGTTCTAGAGCGTTTGAGTCACAGGAATATGCAGAACGAACATCAGCAGCCCTTGGCAGAGTACTGATGCTGGATCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCGGCAGCTTAGATGGCGTGGGAACTCTGCAAATTTGTTATTGACTGAAAAAGTAATCTCTGCAAATGTAGATACAATAGGAGAAACCTTTAATTCTGCAGTGAACCGATATGGACCAAGGGTGAATAGGTCACTTCAAAAAGAGAAAAGGTCAGCATCAGTTGATAGTAGAATGAATTCCCATAATTCTGGTTCGGTATCACAATACCCTGGTCTTTCTGACATCAAATACACATCAATACCCACTAACATGAATATGAAAAGTCAAAAATCAGGAGAATCAATGCTAACTGACTTTAACGTTGTGGCAATTGATTCCGGCGTACCCCGTAGACCCCCTGCTGGAAAGCGTGCAGATGACCAGGTTAATTATCCTAAGTTGGTCGAGTTACTACTTAATAGCTCTGAGTTTTCTTCTAACCTATTACATGATATAACTGGAGGGAGATTAGGATGTCCTCATCTAGAAGACACTAACACAACAACAACCGATGTTCAAACAGATGACATAGCATCACTAGTTCATGAATTTCGTAATGGTTTTCGTGCCGCTCTCATGGACATGCAGGGATTCCATATATTCCTACTCACACTTCATCAAAAACTTGATACTTTGTTAAGGTTATTTATGAATGCTGTAGGCAAAATATCATCAGGAGAGTCTGAAAAGGAGGATGCAGTGGTTCATGACTTACCTTCTCCAGCTTTTGCTGGCAGTTGCCTTTCCCCACCTATTAAGGAGAGACATTCTAATGATATTCATCAAGATTGTAGTGATTCAGAATCACAGAGAACTGCTCCTAGGGCATCATCATCTTCAGGCAGTAGAGATTGCTGTGACTCTGCCTCTCCTGCATCAAGAGAAGGTTGGCATGGAAAGAACTCTAAAGGAAGTGCAGAGTCACTTCGTGGTTTGCGCTTGACAACTAAGCTTCGCGACTTACATAAATTTGCCAAGGTTGACTCAGAATCTAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAATGAGGCAGTCAAGTTATGCATGGAGAACAATTTTAACACAGGATTTTTCGAGGGCAGTGATAACAACACTGTTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCATATCCTTGAGAGGATTGCATTGATATCTGAGGCTGCAAATGCAGAGAGACCATCTGCTGTTACAGATACACTGTTCATTGGTGGAGCGCTGGCTGCAAGATCTACGTACACCTTACAACACTTGGGAATCACACATATTTTATGTTTGTGTACAAACGAAATTGGCCAATCAGATTCACAGTTTCCTGATCTTTTCACATACAAAAATTTCTCTGTATGTGACAAAGAAGATTCTAACATCAGCAGCATATTTGAAGAGGCTTGTGATTTTATAGATTATGTTGAGAAAGCTGGTCAGAGTGTTTTAGTTCATTGCTTTGAGGGGAAAAGCAGAAGTGCCACTTTGGTCCTGGCTTACCTGATGCTTAGGAAGAAATTCACTTTGTTAGAAGCATGGAATGCTCTAAAACGAGTTCATCGTCGATCTCAGCCCAACGATGGTTTTGCAAAGATCTTACTTGAGCTAGACCAGAAACTACATGGCAAGGTTTCAATGGAGTGGCAGCAACGGAAACCAGTGATGAAAATATGTCCCATCTGTGGCAAGAATGCTGGACTAAGTAGTAGTTCGCTTAAACTCCATCTTCAGAAATCACACAAAAAGCTGTCATCAGGGAGTGTGGATAGTGCCATGACAAAGGAGATCCAGAAGGCATTAACAGCTTTGAAGATTAGCCGAGGTGGGAGTGTTAGTCCCACACAAAGGCAGTCTCATTCAATGGTTGATGCATAA 2439 0.4157 MLDIESSSFSWVRLSSLHHTEHTSSNEHSEDEMNRALEVTVNSGGVVFFAFFNGCDSGDGCSKEETAVIKISSSRMATQSECLGYEFAKWLGVQTPQARVIHNTSLEWIQIKEATEKARDAASSARDAIGELTCTELLEALDLSRCLMFMSYVHGSPLLESSRAFESQEYAERTSAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLLTEKVISANVDTIGETFNSAVNRYGPRVNRSLQKEKRSASVDSRMNSHNSGSVSQYPGLSDIKYTSIPTNMNMKSQKSGESMLTDFNVVAIDSGVPRRPPAGKRADDQVNYPKLVELLLNSSEFSSNLLHDITGGRLGCPHLEDTNTTTTDVQTDDIASLVHEFRNGFRAALMDMQGFHIFLLTLHQKLDTLLRLFMNAVGKISSGESEKEDAVVHDLPSPAFAGSCLSPPIKERHSNDIHQDCSDSESQRTAPRASSSSGSRDCCDSASPASREGWHGKNSKGSAESLRGLRLTTKLRDLHKFAKVDSESNKELEQWNEMLKNEAVKLCMENNFNTGFFEGSDNNTVVDAYELKVRLEHILERIALISEAANAERPSAVTDTLFIGGALAARSTYTLQHLGITHILCLCTNEIGQSDSQFPDLFTYKNFSVCDKEDSNISSIFEEACDFIDYVEKAGQSVLVHCFEGKSRSATLVLAYLMLRKKFTLLEAWNALKRVHRRSQPNDGFAKILLELDQKLHGKVSMEWQQRKPVMKICPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTKEIQKALTALKISRGGSVSPTQRQSHSMVDA 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01570 812 Pfam Actin-fragmin kinase, catalytic 3 304 IPR015275 -
Viun9g01570 812 MobiDBLite consensus disorder prediction 458 476 - -
Viun9g01570 812 Gene3D - 157 267 IPR036940 -
Viun9g01570 812 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 811 IPR035010 GO:0004721|GO:0009737|GO:0043622
Viun9g01570 812 MobiDBLite consensus disorder prediction 443 457 - -
Viun9g01570 812 CDD DSP 586 723 - -
Viun9g01570 812 SUPERFAMILY Protein kinase-like (PK-like) 2 317 IPR011009 -
Viun9g01570 812 FunFam Dual specificity protein phosphatase PHS1 557 731 - -
Viun9g01570 812 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 586 730 IPR029021 -
Viun9g01570 812 MobiDBLite consensus disorder prediction 239 264 - -
Viun9g01570 812 ProSitePatterns Tyrosine specific protein phosphatases active site. 672 682 IPR016130 GO:0016311|GO:0016791
Viun9g01570 812 MobiDBLite consensus disorder prediction 435 497 - -
Viun9g01570 812 ProSiteProfiles Dual specificity protein phosphatase domain profile. 585 730 IPR020422 GO:0006470|GO:0008138
Viun9g01570 812 Pfam Dual specificity phosphatase, catalytic domain 599 726 IPR000340 GO:0008138|GO:0016311
Viun9g01570 812 SMART dsp_5 585 727 IPR020422 GO:0006470|GO:0008138
Viun9g01570 812 Gene3D Protein tyrosine phosphatase superfamily 568 740 IPR029021 -
Viun9g01570 812 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 654 706 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01570 Viun-Chr9 22758985 22765158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01570 2 796 Protein tyrosine phosphatase (PTP) family AT5G23720 63.591 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01570 K14165 - gmx:102661225 1288.48