Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01569 ATGGCAAAAGAGCAGCAAAAGCAGGATCCCGGGGCATTCACCAACTCTTTGCGAAACCAAAACCAGGAATTGCAGGGTAAAGGTGAAGTGGAAAAGGAGGAGGCTGAGGCCCCTTTCACTCTCAGCGTCACCTCCAAGGTTTTGTACATGTTGGGAGACATCACAGCAGGGCCTGCGTCTATGTTCGCGCAATGGCTCCAATTAGTTCGTAAACGCACTTCCAATAATCGCACTTCTGGCTTTCCTCACCGTTCTTCCACCATGCCTTCCAGCCCGGGAGAAATTGAAGATGTGAAAAATGATCAGCAAACAGAAATTAGTTTGTGGGAGAGGCTTGGCAAAGCTGAAATGTTGGACATTGAATCGAGTTCATTTTCTTGGGTCAGACTCTCTTCACTTCACCACACTGAACACACTAGCAGCAACGAACATTCTGAGGATGAAATGAACCGAGCTCTCGAGGTAACAGTAAATTCTGGAGGGGTAGTCTTCTTTGCCTTTTTCAACGGTTGTGACAGTGGTGATGGTTGTTCAAAAGAAGAAACAGCTGTTATAAAGATATCGTCTTCAAGAATGGCAACACAATCGGAATGTCTTGGTTATGAATTTGCCAAGTGGTTGGGCGTTCAAACTCCTCAGGCTAGAGTCATCCACAATACCAGTTTAGAGTGGATACAAATAAAGGAAGCTACAGAAAAAGCAAGAGATGCAGCAAGTTCTGCACGTGATGCAATTGGTGAACTGACATGCACAGAACTTCTGGAAGCACTTGATCTTAGTCGATGTCTCATGTTTATGAGTTATGTGCACGGTTCACCCTTGCTTGAAAGTTCTAGAGCGTTTGAGTCACAGGAATATGCAGAACGAACATCAGCAGCCCTTGGCAGAGTACTGATGCTGGATCTTGTCATCAGAAATGAAGATAGGCTCCCTTGCCGGCAGCTTAGATGGCGTGGGAACTCTGCAAATTTGTTATTGACTGAAAAAGTAATCTCTGCAAATGTAGATACAATAGGAGAAACCTTTAATTCTGCAGTGAACCGATATGGACCAAGGGTGAATAGGTCACTTCAAAAAGAGAAAAGGTCAGCATCAGTTGATAGTAGAATGAATTCCCATAATTCTGGTTCGGTATCACAATACCCTGGTCTTTCTGACATCAAATACACATCAATACCCACTAACATGAATATGAAAAGTCAAAAATCAGGAGAATCAATGCTAACTGACTTTAACGTTGTGGCAATTGATTCCGGCGTACCCCGTAGACCCCCTGCTGGAAAGCGTGCAGATGACCAGGTTAATTATCCTAAGTTGGTCGAGTTACTACTTAATAGCTCTGAGTTTTCTTCTAACCTATTACATGATATAACTGGAGGGAGATTAGGATGTCCTCATCTAGAAGACACTAACACAACAACAACCGATGTTCAAACAGATGACATAGCATCACTAGTTCATGAATTTCGTAATGGTTTTCGTGCCGCTCTCATGGACATGCAGGGATTCCATATATTCCTACTCACACTTCATCAAAAACTTGATACTTTGTTAAGGTTATTTATGAATGCTGTAGGCAAAATATCATCAGGAGAGTCTGAAAAGGAGGATGCAGTGGTTCATGACTTACCTTCTCCAGCTTTTGCTGGCAGTTGCCTTTCCCCACCTATTAAGGAGAGACATTCTAATGATATTCATCAAGATTGTAGTGATTCAGAATCACAGAGAACTGCTCCTAGGGCATCATCATCTTCAGGCAGTAGAGATTGCTGTGACTCTGCCTCTCCTGCATCAAGAGAAGGTTGGCATGGAAAGAACTCTAAAGGAAGTGCAGAGTCACTTCGTGGTTTGCGCTTGACAACTAAGCTTCGCGACTTACATAAATTTGCCAAGGTTGACTCAGAATCTAATAAAGAATTGGAACAGTGGAATGAAATGCTTAAAAATGAGGCAGTCAAGTTATGCATGGAGAACAATTTTAACACAGGATTTTTCGAGGGCAGTGATAACAACACTGTTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCATATCCTTGAGAGGATTGCATTGATATCTGAGGCTGCAAATGCAGAGAGACCATCTGCTGTTACAGATACACTGTTCATTGGTGGAGCGCTGGCTGCAAGATCTACGTACACCTTACAACACTTGGGAATCACACATATTTTATGTTTGTGTACAAACGAAATTGGCCAATCAGATTCACAGTTTCCTGATCTTTTCACATACAAAAATTTCTCTGTATGTGACAAAGAAGATTCTAACATCAGCAGCATATTTGAAGAGGCTTGTGATTTTATAGATTATGTTGAGAAAGCTGGTCAGAGTGTTTTAGTTCATTGCTTTGAGGGGAAAAGCAGAAGTGCCACTTTGGTCCTGGCTTACCTGATGCTTAGGAAGAAATTCACTTTGTTAGAAGCATGGAATGCTCTAAAACGAGTTCATCGTCGATCTCAGCCCAACGATGGTTTTGCAAAGATCTTACTTGAGCTAGACCAGAAACTACATGGCAAGGTTTCAATGGAGTGGCAGCAACGGAAACCAGTGATGAAAATATGTCCCATCTGTGGCAAGAATGCTGGACTAAGTAGTAGTTCGCTTAAACTCCATCTTCAGAAATCACACAAAAAGCTGTCATCAGGGAGTGTGGATAGTGCCATGACAAAGGAGATCCAGAAGGCATTAACAGCTTTGAAGATTAGCCGAGGTGGGAGTGTTAGTCCCACACAAAGGCAGTCTCATTCAATGGTTGATGCATAA 2787 0.4252 MAKEQQKQDPGAFTNSLRNQNQELQGKGEVEKEEAEAPFTLSVTSKVLYMLGDITAGPASMFAQWLQLVRKRTSNNRTSGFPHRSSTMPSSPGEIEDVKNDQQTEISLWERLGKAEMLDIESSSFSWVRLSSLHHTEHTSSNEHSEDEMNRALEVTVNSGGVVFFAFFNGCDSGDGCSKEETAVIKISSSRMATQSECLGYEFAKWLGVQTPQARVIHNTSLEWIQIKEATEKARDAASSARDAIGELTCTELLEALDLSRCLMFMSYVHGSPLLESSRAFESQEYAERTSAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLLTEKVISANVDTIGETFNSAVNRYGPRVNRSLQKEKRSASVDSRMNSHNSGSVSQYPGLSDIKYTSIPTNMNMKSQKSGESMLTDFNVVAIDSGVPRRPPAGKRADDQVNYPKLVELLLNSSEFSSNLLHDITGGRLGCPHLEDTNTTTTDVQTDDIASLVHEFRNGFRAALMDMQGFHIFLLTLHQKLDTLLRLFMNAVGKISSGESEKEDAVVHDLPSPAFAGSCLSPPIKERHSNDIHQDCSDSESQRTAPRASSSSGSRDCCDSASPASREGWHGKNSKGSAESLRGLRLTTKLRDLHKFAKVDSESNKELEQWNEMLKNEAVKLCMENNFNTGFFEGSDNNTVVDAYELKVRLEHILERIALISEAANAERPSAVTDTLFIGGALAARSTYTLQHLGITHILCLCTNEIGQSDSQFPDLFTYKNFSVCDKEDSNISSIFEEACDFIDYVEKAGQSVLVHCFEGKSRSATLVLAYLMLRKKFTLLEAWNALKRVHRRSQPNDGFAKILLELDQKLHGKVSMEWQQRKPVMKICPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTKEIQKALTALKISRGGSVSPTQRQSHSMVDA 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01569 928 MobiDBLite consensus disorder prediction 76 99 - -
Viun9g01569 928 SMART dsp_5 701 843 IPR020422 GO:0006470|GO:0008138
Viun9g01569 928 ProSiteProfiles Dual specificity protein phosphatase domain profile. 701 846 IPR020422 GO:0006470|GO:0008138
Viun9g01569 928 MobiDBLite consensus disorder prediction 574 592 - -
Viun9g01569 928 MobiDBLite consensus disorder prediction 355 380 - -
Viun9g01569 928 Pfam Actin-fragmin kinase, catalytic 105 420 IPR015275 -
Viun9g01569 928 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 927 IPR035010 GO:0004721|GO:0009737|GO:0043622
Viun9g01569 928 MobiDBLite consensus disorder prediction 76 97 - -
Viun9g01569 928 MobiDBLite consensus disorder prediction 551 613 - -
Viun9g01569 928 MobiDBLite consensus disorder prediction 1 37 - -
Viun9g01569 928 MobiDBLite consensus disorder prediction 559 573 - -
Viun9g01569 928 Gene3D Protein tyrosine phosphatase superfamily 684 856 IPR029021 -
Viun9g01569 928 Gene3D - 273 383 IPR036940 -
Viun9g01569 928 SUPERFAMILY Protein kinase-like (PK-like) 64 433 IPR011009 -
Viun9g01569 928 CDD DSP 702 839 - -
Viun9g01569 928 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 770 822 IPR000387 GO:0016311|GO:0016791
Viun9g01569 928 FunFam Dual specificity protein phosphatase PHS1 673 847 - -
Viun9g01569 928 MobiDBLite consensus disorder prediction 8 24 - -
Viun9g01569 928 ProSitePatterns Tyrosine specific protein phosphatases active site. 788 798 IPR016130 GO:0016311|GO:0016791
Viun9g01569 928 Pfam Dual specificity phosphatase, catalytic domain 715 842 IPR000340 GO:0008138|GO:0016311
Viun9g01569 928 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 702 846 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01569 Viun-Chr9 22758985 22765744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01569 33 912 Protein tyrosine phosphatase (PTP) family AT5G23720 62.752 0.0 1081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01569 K14165 - gmx:102661225 1472.99