Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01567 ATGCCTTTCAACGAAACCCTTTTTCCTCAACGGTGTGAAACGAAGGGGAAAACAGCGAAGATGAAAGATTCAGCGGAAACAGATCCTATTGCTGAGTCTCTCAACCTACTGAGTACAATTTTGGACTCGGAACTACCCAGCGTCACAAACTTTAAAGGGAAATGGTCCCTTGCCCGAGTCAAACTCACCCATCTCCAAACTCACCTCACCGATTTCTCCGCCGAGTTCCCCTACGCCTCCGCCACCAACCCCCTCTCCCTCCACCTCCTCCACTCGATCTCCCGCACACTCAAAGACGCCGTTTTACTCGCCCGCACGTGCCAGCCCCAAGACCTCCTTAACGGCAAGCTCAAAACACAAAGCGACCTCGACTCCCTCCTGGCCACCCTCGATCGCCACGTCACCGACTGCGACATCCTCTTCCGCAGCGGCCTTCTCATTGAAAGCGCCGCCGGTTCCACATCCAAAAGAGAAGCTATCCGCTCCTCGTCACGAAACCTAATTACCCGGTTGCAAATCGGGTCGCCCGAGTCCAAAACCTCCGCGATGGACTCTCTATTGGACCTCCTTAATGAAGACGACAAAAATGTTACCATTGCTGTGGCCCAGGGCGTCGTTCCCATGCTCGTGCGCCTACTCGATTCACCCTCCGACATGAAGGAGAAAATAGTCGCCGCCATCGCCAAAGTATCCACAGTTGAAAGCGCCAAGACTGTGCTCATCGCAGAGGGTTTGCTTCTTCTCAACCACCTTCTCCGAGTACTGGATTCTGGAAGCGGATTCGCGATTGAGAAATCATGCATCGCGCTTCAAGCACTGAGTCTTACCAAGGACAACGCCAGAGCGATTGGCTCGCGCGGCGGAATCTCGTCTCTGCTGGAGATTTGCCAGGCTGGCACCCCTGGCGCGCAGGCCTCCGCAGCCGCCGTGTTGCGCAACCTCGCCGCGTTCGCGGAAATTAGGGACAATTTCGCGGAGGAGAATGCAGTGGTGGTTTTAGTCGCCTTGGCTTCCTCCGGGACTGCTTCGGCGCGTGAAAACGCGATTGGGTGTTTGTCGAATTTGATTTCCGAGGCTGACTCGGACGGTTTGTCGAATTTGAGGGTTATGGTGGTTAAAGAAGGGGGGATTGAGTGTTTGAAGAATTACTGGGACTCGGGTACTCCAATTCCGAGTCTTGAAGTCGCAGTGACGATGTTGCGGCATTTGGCTGTGAGTACTGCAATTGGGGAAGTGCTGATAGGTGAAGGGTTTGTTCGGAGGCTCGTGGGGGTGCTGAACTGTGAGGTGCTGGCGATGAGGGTTGCCGTCGCGAGGGCGGTTCACGCTATAGGGTCGAACAGTGGGAGGGCAAGGAAGGAGATGGGCGAATTGGGGTGCGTTTTTGCTCTGATTAAGATGTTGGATGGGAAAGGTGTAGAGGAGAAAGAGGTTTCTGCAATGGCATTGTCGGTACTGCTGATGCACCCTGCGAATAGGAGGGTTTTCCGCAAGGATGAAAGAGGGGTTGTTAGTGCTGTTCATTTGTTGAACCCTTCGTTGCAAGGGTTGGATAAGAAGTACCCTGTTTCGTTGCTGGTTTCGTTAGTGCATTCGAAGAGTTGCAGAAAGCAGATGGTAGCAGCAGGGGCTTGTGTATATACGCAGAAGCTTGTGGAGATGGATGTGCCGGGATCAAAGAAACTCTTGGAGAGTCTCGGGCGTGGTAAGATTTGGGGTGTTTTTTCTAGACCCTAG 1737 0.536 MPFNETLFPQRCETKGKTAKMKDSAETDPIAESLNLLSTILDSELPSVTNFKGKWSLARVKLTHLQTHLTDFSAEFPYASATNPLSLHLLHSISRTLKDAVLLARTCQPQDLLNGKLKTQSDLDSLLATLDRHVTDCDILFRSGLLIESAAGSTSKREAIRSSSRNLITRLQIGSPESKTSAMDSLLDLLNEDDKNVTIAVAQGVVPMLVRLLDSPSDMKEKIVAAIAKVSTVESAKTVLIAEGLLLLNHLLRVLDSGSGFAIEKSCIALQALSLTKDNARAIGSRGGISSLLEICQAGTPGAQASAAAVLRNLAAFAEIRDNFAEENAVVVLVALASSGTASARENAIGCLSNLISEADSDGLSNLRVMVVKEGGIECLKNYWDSGTPIPSLEVAVTMLRHLAVSTAIGEVLIGEGFVRRLVGVLNCEVLAMRVAVARAVHAIGSNSGRARKEMGELGCVFALIKMLDGKGVEEKEVSAMALSVLLMHPANRRVFRKDERGVVSAVHLLNPSLQGLDKKYPVSLLVSLVHSKSCRKQMVAAGACVYTQKLVEMDVPGSKKLLESLGRGKIWGVFSRP 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01567 578 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 28 576 - -
Viun9g01567 578 Gene3D - 153 388 IPR011989 -
Viun9g01567 578 Gene3D - 390 564 IPR011989 -
Viun9g01567 578 SUPERFAMILY ARM repeat 166 511 IPR016024 -
Viun9g01567 578 SMART arm_5 317 357 IPR000225 GO:0005515
Viun9g01567 578 SMART arm_5 193 232 IPR000225 GO:0005515
Viun9g01567 578 SMART arm_5 447 488 IPR000225 GO:0005515
Viun9g01567 578 SMART arm_5 276 316 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01567 Viun-Chr9 22479160 22481281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01567 142 389 U-box Gene Family AT2G23140 26.460 8.02e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01567 - - vum:124844092 1000.35