Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01553 ATGCTTTACACGGAACCTGAAGTGGGAAGGTTGTTGAGTTGGTCTCACAAGGTGAACATCGTTGTTGGATTGGCCTCTGTGCTGGTTTACCTTCACCAAGAATGTGAGCGGAGAGTGGTTCACAGGGACATTAAAACTAGGAACATATTGCTGGATGGAAACATGAATCCCAGGTTGGGGGATTTCGGATTGGAAAAGTTGATGGATCATGATAAGAGTCATGTGTCCACTTTGACGGCTGGAATAATGGCCTTAGATACCTCCTCTTTTTTGTTTCTTGGTGCAGTTTTATGCTACTGGTGCGAAAAGAATGTTTCAATGTTTATTGAAGCGGTGAGTGCAGTTTTGTTTCTCAGTGCAGAATTTCCTTCTGGTGTTGAAAGCATTTGTGGCAGCAATTTAAGGAAAATTGGACAGCGTGATCCATTCAAGTTTTGGATTCATGAGGCTACACAATTGGCAGCAGTGCAGCAGCAGGCTGATCCATTCCTTTTGGCAGGCATACGTCCAATTATACCACGCCAATCTTGGTTGTTGGCTGGAATTATGGTGATTCTTGCTGCTTTGTGGGGATGTCTGGAACGTGATCTTTTGCTGGTTTGGACAGCAAGCATGAGGATGTTTGTAGCTGTTTATGTTGTTGTCTCTCTTCTATTTAGGAGTGATTTCTACTGGTTTGGCAGCACGTCTCATACATTCTAG 702 0.4373 MLYTEPEVGRLLSWSHKVNIVVGLASVLVYLHQECERRVVHRDIKTRNILLDGNMNPRLGDFGLEKLMDHDKSHVSTLTAGIMALDTSSFLFLGAVLCYWCEKNVSMFIEAVSAVLFLSAEFPSGVESICGSNLRKIGQRDPFKFWIHEATQLAAVQQQADPFLLAGIRPIIPRQSWLLAGIMVILAALWGCLERDLLLVWTASMRMFVAVYVVVSLLFRSDFYWFGSTSHTF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01553 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 39 51 IPR008271 GO:0004672|GO:0006468
Viun9g01553 233 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 11 81 - -
Viun9g01553 233 Pfam Protein kinase domain 18 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01553 233 SUPERFAMILY Protein kinase-like (PK-like) 9 77 IPR011009 -
Viun9g01553 233 FunFam Os07g0541700 protein 1 82 - -
Viun9g01553 233 ProSiteProfiles Protein kinase domain profile. 1 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01553 233 Gene3D Transferase(Phosphotransferase) domain 1 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01553 Viun-Chr9 21518191 21539797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01553 1 96 Receptor kinase-like Gene Family AT5G55830 58.763 1.11e-30 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun9g01553 Pkinase 4.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01553 - - vun:114163552 471.855