Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01525 ATGGAAAACAACCAGCAAGGGGGCCAAGGGCAATCGGGAGCGTACCCCGGCGCGGCTGCCGGAAGTGCAGGTGCAGGTGCAGGAGCGCCCCCCTTTCAGCATCTCCTCCACCAGCAGCAGCAGCAGCTGCAGATGTTCTGGTCCTACCAGCGTCAAGAGATCGAGCACGTCAACGACTTCAAGAACCACCAGCTGCCCCTCGCTCGCATCAAGAAGATTATGAAGGCCGATGAGGACGTCCGCATGATCTCGGCAGAGGCCCCAATCCTCTTCGCCAAGGCATGCGAGCTCTTCATCCTTGAGCTCACCATCCGCTCCTGGCTCCACGCCGAGGAGAACAAGCGCCGCACCCTCCAGAAGAACGACATCGCCGCCGCCATCACCCGCACCGACATTTTCGACTTCCTTGTTGACATCGTTCCTCGCGACGAGATCAAGGACGACGCTGCGCTCGTCGGGGCCACTGCTAGTGGCGTGCCCTACTACTACCCCCCCATTGGCCAGCCTGCCGGCATGATGATTGGCCGTCCCGCCGTTGATCCCGCCACCGGAGTCTACGTCCAGCCCCCGTCCCAGGCCTGGCAGTCTGTCTGGCAGTCCGCTGCCGACGACGCGTCCTACGGTGGCGCAGGCGGAGCCGGTGCGCAGGGGAGCATTGATGGCCAGAGCTGA 672 0.6339 MENNQQGGQGQSGAYPGAAAGSAGAGAGAPPFQHLLHQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDDAALVGATASGVPYYYPPIGQPAGMMIGRPAVDPATGVYVQPPSQAWQSVWQSAADDASYGGAGGAGAQGSIDGQS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01525 223 MobiDBLite consensus disorder prediction 1 31 - -
Viun9g01525 223 FunFam Nuclear transcription factor Y subunit gamma 33 142 - -
Viun9g01525 223 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 38 157 - -
Viun9g01525 223 Gene3D Histone, subunit A 31 142 IPR009072 GO:0046982
Viun9g01525 223 Pfam Core histone H2A/H2B/H3/H4 53 127 IPR007125 GO:0003677
Viun9g01525 223 SUPERFAMILY Histone-fold 39 136 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01525 Viun-Chr9 19492690 19498546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01525 3 202 CCAAT-HAP5 Transcription Factor Family AT3G48590 77.512 8.32e-104 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Viun9g01525 CBFD_NFYB_HMF 2.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01525 - - gmx:100783316 337.421