Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01524 ATGGAATGTAAAAAGGATGGTGCCTTAAGGGCAAAAGAACTTGCAGAGAAGATGTTTTTACAGAAGGACTTTGGTGGGGCAAGAATGCTTGCAATGAAGGCTCTAGAATTATATCCCAATCTTGATGACCTTCCTCGATTTCTGGCAACTATTGAGGTGTATATCTCAGCGGATAAAAAGGTTAATGGAGAAGTTGATTGGTACAAGATCCTTGGTGTGCAACCCTTGGCTGATGAAGAAACAATTCGAAGACGATATAGGAAACTGGCTCTTACTCTACATCCTGATAAAAATAAATCTGTAGGAGCAGATGGGGCGTTTAACCTTATCTCACAGGCTTGGAGTTTATTATCTGATAAAGACAAGAGGATCACATATGACCAAAAGTACAACTTATGGCGTACATATCATGGAAATCCTGGTGGGAAACCATCTGTGCCAGTTACTCAGAATGTTTTATACAGTAGTTTCTTCAGTCCTATGTTGTTGAAACCCACATTTTGGACCATTTGCAATTCCTGTAAGACAAAGTTTGAGTACCATAATGTTTATATTAACTCTGATCTTGTCTGTACATGTTGCCATAAGCCATTTGTGGCTTCTGAGACATCACCTCCACCTGTATACAGAAATGGTTCATCCTCTTCAAGAATTTCTCAGATGAAGCAACATAACTTCAACTTAAGCAGAATGGAAAGAAGTAATGGAAATCATGTTCCCGGAAGGACATCAATGTCTGCTGTCAATTCAGCACACGGGTCAGGTCCTTTCTCTATGCCCAGTGGCAGTTTTCGCGTACCAACATCAGTTTCTAGTGCTGCAGAAACTCTTGGTGCTTTTAGGATGCCTTCTGAAAATTTGAAGAGAATGCATGAAGATTCAACTGTGTCTTTGGAGAATGCCCAAATTGGGAAAATTCATGCTGCTGAGAGAACTGGTGCTGGTTCAGTTTTTCAGTCCTCTGGTTTTGGTTCATATTCTATTATGAAAGGTGACAAGCCAAGGAAGAGAAGGTCCACTGATGAACATAAAGTATGTAGAGATGGAAGAGATGTGGAAAGCAAAACAGTATCTCAAACTGAAGGAACAAACTTGGCTAATGAATTTGGGTCAGGAAGGGCTAATGCTGCTGGAAATTACAAACGCAATGGTGTTAGGGACGTATCACAGCTTCAAATGAAGCACCTATTGATGGAAAAGGCTCGGAAGGAGATTCTTAAAAATCTTGGTGAATTGAAAGCTTCTTTTGCATCAAAGATTCTAAACAAGTCAAAGAATACTGACACAGAAATCAGTGAGAGGGGGAAAAGTTGTGAAATTAATGGTTTAAAGCCTGGTGCACTAAAATTTGTTGATTCTAAGGCTGCCGGCAAGAAGTGTTTTTCTGTTCATCCAGATCCTGAGCTTCCTGGTTCTCTCTCTATGAATGTTCCAGACCCAGATTTCCATGATTTTGATGGAGACCGTATTGAAAATGCTTTTGGTGAGAACCAGGTGTGGGCTGCGTATGACAATGATGATGGCATGCCCCGGTTCTATTGTTTAATCCATGATGTAATCTCAAAGAATCCTTTCAATATGAGGATAAGCTGGTTGAATACGAAAAGCAATGATGAATTGGCCCCAATAAAGTGGATCAGTTCTGGCTTTCTTAAGACCAGTGGAGATTTCAGAATAGGAAAGCGTGTGTCCTATAGCACTCTTAACTCCTTTTCGCACAGGGTGAAATGGACAAAGGGTTCGAGAGGGGTTGTCCATATATATCCGAAGAAAGGTGATGTATGGGCACTGTATCGGAACTGGTCCCTTGACTGGAATGAATTCACTAAAGATGAAATCATACAGAAATATGACATGGTGGAGGTGCTTGAAGATTACAGTGAAGAGCAAGGGGTGAGTGTTGCCCCACTTGTCAAGCTTGCAGGTTTCAAGACGGTATTCCGCCAGAATGTTGATCCAATAAAAGTCAGGAATATTTCAAAGGCGCAGATGTTTCGTTTCTCACACCAAGTACCTTCATACTTGCTTACTGGTGAAGAGGGTCCCAATGCTCCTAAAGGTTGCTTGGAGCTTGATCCTGCTGCTACACCGATGGAGCTTCTTCAGGTGTTAGCTGAAGATCTGGAGCAAGAAATAATAATGACAACTGAAAAATCTGCCGAAGATGAATTGAAGCACGGAGAGAATTCCAGGGAGGAGGGTTCGCTTAAGGGGTGCCAGACAACCAAGGAAGAAGGTTCTGATGCAGGATTAGGAGAGAAGAGAAGCAAGCCTGAGATTTTGTTTGTATATAAGCGGAGACGTCTGGGGGAAAAGAGAGCTGTGAAATGTTAA 2334 0.4165 MECKKDGALRAKELAEKMFLQKDFGGARMLAMKALELYPNLDDLPRFLATIEVYISADKKVNGEVDWYKILGVQPLADEETIRRRYRKLALTLHPDKNKSVGADGAFNLISQAWSLLSDKDKRITYDQKYNLWRTYHGNPGGKPSVPVTQNVLYSSFFSPMLLKPTFWTICNSCKTKFEYHNVYINSDLVCTCCHKPFVASETSPPPVYRNGSSSSRISQMKQHNFNLSRMERSNGNHVPGRTSMSAVNSAHGSGPFSMPSGSFRVPTSVSSAAETLGAFRMPSENLKRMHEDSTVSLENAQIGKIHAAERTGAGSVFQSSGFGSYSIMKGDKPRKRRSTDEHKVCRDGRDVESKTVSQTEGTNLANEFGSGRANAAGNYKRNGVRDVSQLQMKHLLMEKARKEILKNLGELKASFASKILNKSKNTDTEISERGKSCEINGLKPGALKFVDSKAAGKKCFSVHPDPELPGSLSMNVPDPDFHDFDGDRIENAFGENQVWAAYDNDDGMPRFYCLIHDVISKNPFNMRISWLNTKSNDELAPIKWISSGFLKTSGDFRIGKRVSYSTLNSFSHRVKWTKGSRGVVHIYPKKGDVWALYRNWSLDWNEFTKDEIIQKYDMVEVLEDYSEEQGVSVAPLVKLAGFKTVFRQNVDPIKVRNISKAQMFRFSHQVPSYLLTGEEGPNAPKGCLELDPAATPMELLQVLAEDLEQEIIMTTEKSAEDELKHGENSREEGSLKGCQTTKEEGSDAGLGEKRSKPEILFVYKRRRLGEKRAVKC 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01524 777 MobiDBLite consensus disorder prediction 720 753 - -
Viun9g01524 777 Pfam DnaJ domain 66 127 IPR001623 -
Viun9g01524 777 PRINTS DnaJ domain signature 86 101 IPR001623 -
Viun9g01524 777 PRINTS DnaJ domain signature 68 86 IPR001623 -
Viun9g01524 777 PRINTS DnaJ domain signature 102 122 IPR001623 -
Viun9g01524 777 Pfam Domain of unknown function (DUF3444) 474 680 IPR024593 -
Viun9g01524 777 Gene3D DnaJ domain 64 167 IPR036869 -
Viun9g01524 777 MobiDBLite consensus disorder prediction 330 355 - -
Viun9g01524 777 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Viun9g01524 777 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Viun9g01524 777 Coils Coil 698 718 - -
Viun9g01524 777 SUPERFAMILY Chaperone J-domain 63 146 IPR036869 -
Viun9g01524 777 PANTHER BNAC03G44070D PROTEIN 1 697 - -
Viun9g01524 777 SMART dnaj_3 65 122 IPR001623 -
Viun9g01524 777 MobiDBLite consensus disorder prediction 720 739 - -
Viun9g01524 777 CDD DnaJ 66 119 IPR001623 -
Viun9g01524 777 MobiDBLite consensus disorder prediction 328 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01524 Viun-Chr9 19487060 19491244 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01524 8 208 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.173 9.75e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01524 - - gmx:100797672 1228.77