Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01507 ATGGAGAAACAGCAAGTTATGCTCCCTACAGCATCTACATCATCAACAGCTTTATCATCTCAGAACCAAAGTGACAAGGAAGCTAAGCACCACCGATATGCATTTCAAACCAGAAGCCCTGTTGATGTTCTGGATGATGGGTACCAGTGGAGAAAATATGGGAAAAAGATAGTCAAAAACAATACTTTTCCAAGTTACTACAGGTGTGCTCATCGAGAGTGCAATGTTAAGAAACAAATCCAACGGCATTCGGACGATGAACAGATCGTGGTCACAACCTACGAAGGGACACATACACACCCTGTGGATAAGTCCGTGGAAACCTTTGACCAGATCTTGGGCAACCTACTCATAGACAATCTACTCAATAATGCACCTCCCACAATAGAATAG 393 0.43 MEKQQVMLPTASTSSTALSSQNQSDKEAKHHRYAFQTRSPVDVLDDGYQWRKYGKKIVKNNTFPSYYRCAHRECNVKKQIQRHSDDEQIVVTTYEGTHTHPVDKSVETFDQILGNLLIDNLLNNAPPTIE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01507 130 MobiDBLite consensus disorder prediction 1 36 - -
Viun9g01507 130 Pfam WRKY DNA -binding domain 45 101 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01507 130 ProSiteProfiles WRKY domain profile. 39 103 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01507 130 FunFam WRKY transcription factor 57 30 103 - -
Viun9g01507 130 Gene3D WRKY domain 28 103 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01507 130 SUPERFAMILY WRKY DNA-binding domain 36 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01507 130 SMART WRKY_cls 44 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01507 130 MobiDBLite consensus disorder prediction 1 23 - -
Viun9g01507 130 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 105 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01507 Viun-Chr9 18984212 18985216 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01507 32 118 WRKY Transcription Factor Family AT5G13080 65.909 8.08e-41 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g01507 WRKY 1.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01507 - - vum:124842421 218.779