Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01506 ATGGAGAAACAGCAAGTTATGCTCCCTACAGCATCTACATCATCAACAGCTTTATCATCTCAGAACCAAAGTGACAAGGAAGCTAAGCACCACCGATATGCATTTCAAACCAGAAGCCCTGTTGATGTTCTGGATGATGGGTACCAGTGGAGAAAATATGGGAAAAAGATAGTCAAAAACAATACTTTTCCAAGAAGTTACTACAGGTGTGCTCATCGAGAGTGCAATGTTAAGAAACAAATCCAACGGCATTCGGACGATGAACAGATCGTGGTCACAACCTACGAAGGGACACATACACACCCTGTGGATAAGTCCGTGGAAACCTTTGACCAGATCTTGGGCAACCTACTCATAGACAATCTACTCAATAATGCACCTCCCACAATAGAATAG 396 0.4293 MEKQQVMLPTASTSSTALSSQNQSDKEAKHHRYAFQTRSPVDVLDDGYQWRKYGKKIVKNNTFPRSYYRCAHRECNVKKQIQRHSDDEQIVVTTYEGTHTHPVDKSVETFDQILGNLLIDNLLNNAPPTIE 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01506 131 SMART WRKY_cls 44 103 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01506 131 ProSiteProfiles WRKY domain profile. 39 104 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01506 131 Pfam WRKY DNA -binding domain 45 102 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun9g01506 131 Gene3D WRKY domain 28 104 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01506 131 FunFam WRKY transcription factor 57 30 104 - -
Viun9g01506 131 MobiDBLite consensus disorder prediction 1 23 - -
Viun9g01506 131 SUPERFAMILY WRKY DNA-binding domain 36 103 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun9g01506 131 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 18 106 IPR044810 GO:0003700
Viun9g01506 131 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01506 Viun-Chr9 18984212 18985216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01506 32 119 WRKY Transcription Factor Family AT5G13080 67.045 1.87e-43 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun9g01506 WRKY 6.1e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01506 - - vum:124842421 225.328