Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01490 ATGGCCAAAACGGAGTCTGGAACTGAACTGAACATAAAGCAAGGAGAACCAACGCGAGTTCAGCCTGCAGAGGAAACAGATAATGGACCCTACTTTCTTTCAAACCTTGACCAGAACATTGCTGTTCCAGTGCGCACGGTGTACTGCTTCAAATCTGCTTCCAGAGGAAACGAGGATGCTGCACAAGTTATCAAAGATTCCTTGTCGAAGATTCTTGTCCCTTATTACCCCATGGCAGGCACGCTGTCGATAAGCTCGGAAGGGAAGTTGATAGTGCGTAATCCTGGTGAGGGTGCATTGTTTGTTGAGGCTGAAGCAAACTCTGACATCGATGAGATAGGAGACTTGACAAAACCAGACCCTCATACTCTTGGGAAACTGGTTTACAATGTTCCTGGTGCTCGAAACATTCTTGAGATGCCTCTTATGACTGTTCAGGTGACAAAGTTCAAATGCGGAGGTTTTACTTTGGGGCTTTGCATGAACCACTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGTGAGACAGCTCGAGGTTTAGACTTAAAAATCCCACCATTTCTTGATCGAACCATAATCAAAGCACGTGATCCTCCCAAAGTAGAGTTCAAACACAACGAATTTGCCGAAATAGAAGATGTGTCAAACACTAGAAAGCTTTACGAGGAAGAAAACATGCTCTACAGATCCTTCTTCTTCGATCCTGAGAAGATCGATCTACTGAAGAAAAAGGTCACAGAAGACGGAGTTTTGAGCAAGTGCTCAACTTTTGAAGCGCTCTCAGCGTTTGTATGGAGAGCTCGAACTGCAGCATTAAGGATGCAACCTGAGCAACAAACAAAGCTTCTCTTTGCAGTTGATGGAAGGTCAAGATTCGTTCCCCCAATACCAGAAGGGTACTTTGGCAATGCTATTGTGTTGACAAATTCGTTGTGTGAGGCTGGGGAGTTATTGAAGAACCCTTTGTCATATTCCGTGGGATTGGTTCGCAAGGCAATTGACATGGTCACTGATAATTACATGAGATCTGCCATTGACTATTTTGAAGTCACACGAGCTAGGCCATCTCTAACAGCCACACTTTTGATCACAACTTGGACTAAGTTGTCTTTCCACACCACAGATTTTGGCTGGGGTGAACCTCTATGTTCTGGTCCTGTCACCCTGCCAGAGAAAGAAGTCATTTTGTTTTTATCTCATGGTCAAGAAAGGAAAAACGTAAATGTTCTTCTGGGTTTGCCCAAGTCTGCCATGGAAATTTTTGAAGACTTGGTGATGCAGGTGTGA 1302 0.4432 MAKTESGTELNIKQGEPTRVQPAEETDNGPYFLSNLDQNIAVPVRTVYCFKSASRGNEDAAQVIKDSLSKILVPYYPMAGTLSISSEGKLIVRNPGEGALFVEAEANSDIDEIGDLTKPDPHTLGKLVYNVPGARNILEMPLMTVQVTKFKCGGFTLGLCMNHCMKDGLCAMEFVNAWSETARGLDLKIPPFLDRTIIKARDPPKVEFKHNEFAEIEDVSNTRKLYEEENMLYRSFFFDPEKIDLLKKKVTEDGVLSKCSTFEALSAFVWRARTAALRMQPEQQTKLLFAVDGRSRFVPPIPEGYFGNAIVLTNSLCEAGELLKNPLSYSVGLVRKAIDMVTDNYMRSAIDYFEVTRARPSLTATLLITTWTKLSFHTTDFGWGEPLCSGPVTLPEKEVILFLSHGQERKNVNVLLGLPKSAMEIFEDLVMQV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01490 433 MobiDBLite consensus disorder prediction 1 31 - -
Viun9g01490 433 MobiDBLite consensus disorder prediction 1 15 - -
Viun9g01490 433 Gene3D - 7 214 IPR023213 -
Viun9g01490 433 Gene3D - 215 433 IPR023213 -
Viun9g01490 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 428 - -
Viun9g01490 433 FunFam Tryptamine hydroxycinnamoyl transferase 217 431 - -
Viun9g01490 433 Pfam Transferase family 17 428 - -
Viun9g01490 433 FunFam Spermidine hydroxycinnamoyl transferase 10 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01490 Viun-Chr9 18355151 18359297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01490 9 433 Monolignol Biosynthesis Gene Families AT5G48930 36.735 8.08e-91 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01490 K15400 - gmx:100794490 771.541