Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g01468 | ATGGCAGTCACATTCTATGATCTTAGCTCTGCCTCTGGGTTGAAGAAGCTTGATGAGTACCTTCTCTCACGCAGTTACATCACCGGGTACCAAGCTTCAAAGGATGATCTTACTGTCTATGCAGCTTTGCCAACTGCTCCATCAGCTGAGTATGTCAATGTGTCTAGGTGGTTCAAGCACATTGATGCTTTGTTGAGAATCTCTGGTGTTTCTGGTGAGGGATCTGGCGTCACTGTTAAGGGATCTTTTGTTGCTGAGCCTGTTGCAACTCCCCCAGCTGCTGATACAAAGGCTGCTGCTGCTGAGGATGACGATGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAGGAAGAGAAGAAGGCAGCGGAGGAACGAGCAGCTGCAGTGAAGGCATCTGGAAAAAAGAAAGAATCTGGGAAGTCATCTGTTCTGTTGGATGTGAAACCATGGGATGATGAAACCGACATGAAGAAGCTCGAGGAAGCAGTGAGATCTGTTAGCATGGAAGGGTTGCTTTGGGGTGCATCCAAACTTGTTCCTGTTGGGTACGGCATCAAGAAACTGCAAGTTATGCTTACTATCGTGGATGACCTAGTTTCTGTCGACACTCTTATTGAGGAACATCTCACAGTTGAGCCCATCAATGAATATGTCCAGAGTTGTGACATTGTGGCCTTCAATAAAATTTAA | 693 | 0.4603 | MAVTFYDLSSASGLKKLDEYLLSRSYITGYQASKDDLTVYAALPTAPSAEYVNVSRWFKHIDALLRISGVSGEGSGVTVKGSFVAEPVATPPAADTKAAAAEDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVSMEGLLWGASKLVPVGYGIKKLQVMLTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKI | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g01468 | 230 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 219 | 230 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Viun9g01468 | 230 | Pfam | EF-1 guanine nucleotide exchange domain | 143 | 230 | IPR014038 | GO:0003746|GO:0006414 | |
Viun9g01468 | 230 | Coils | Coil | 113 | 133 | - | - | |
Viun9g01468 | 230 | SUPERFAMILY | GST C-terminal domain-like | 11 | 67 | IPR036282 | - | |
Viun9g01468 | 230 | MobiDBLite | consensus disorder prediction | 115 | 135 | - | - | |
Viun9g01468 | 230 | Gene3D | - | 134 | 230 | IPR014717 | - | |
Viun9g01468 | 230 | SUPERFAMILY | eEF-1beta-like | 138 | 230 | IPR036219 | - | |
Viun9g01468 | 230 | PANTHER | EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER | 8 | 230 | - | - | |
Viun9g01468 | 230 | Gene3D | - | 4 | 80 | - | - | |
Viun9g01468 | 230 | SMART | EF1_GNE_2 | 141 | 230 | IPR014038 | GO:0003746|GO:0006414 | |
Viun9g01468 | 230 | CDD | EF1B | 139 | 230 | IPR014038 | GO:0003746|GO:0006414 | |
Viun9g01468 | 230 | FunFam | Elongation factor 1-beta 1 like | 135 | 230 | - | - | |
Viun9g01468 | 230 | FunFam | Elongation factor 1-delta 1 | 3 | 78 | - | - | |
Viun9g01468 | 230 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 105 | 113 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g01468 | Viun-Chr9 | 17520317 | 17522554 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g01468 | 5 | 230 | Eukaryotic Initiation Factors Gene Family | AT2G18110 | 81.140 | 8.82e-116 | 328 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g01468 | K03232 | - | gmx:100777627 | 345.125 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun9g01468 | 9 | 17520317 | 17522554 | Viun9g01468 | 9 | 17520317 | 17522554 | ECH |