Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01465 ATGGTTTCAACGAGACGCAACAGTGGATCTTTCTCTAACGCCAACAAGAGGCCGTCTTCGTCTGAAGACAAAACTCCCTCTCCTTCCCCCAAGCGCCAAAAGGTCGACAATGTTGCTGCCGCCTCGGAGAAACCGATGCCGCCGGCGGAAAATTCCAAGGATTTGGGCATGACGGAGCCTCCCGCTGATCCCGGAGAATGCGAATCTGGAGACGCTCAGATCGCCGGCGACGTCAATCCAGATGGCAAGGCCGACCCCACGCCGCCGATCGCTGATGGTTCTACACCGACTGTGGTTGCTGATAAACCTAGGGGTTCGTTCTCTTCTTGGGCTATATTTCAGAAGCAAAACCCGAATTTCGAGGCTTCAGTTCCCTGGTGCAGACTCTTGTCTCAATCTGCGCAGAATCCCAATGTTTTAATTTGCACACCCAACTTTACTATTGGGTCTAGTAGGGGTTGCAATTTCCCGTTGAAGGATCAGACTATTAGTGGAAATTTGTGTAAGATCAAGCACACGCAGCGCGAGGGAAGTGCTGTGGCCGTGCTAGAAAGTACGGGTAGCAAAGGATCGGTGGTAGTGAATGGCACGCTCGTCAAGAAGATTACCAGTTGTGTGCTTAACTCGGGGGACGAGGTGGTTTTTGGTTTGATTGGGAATCATTCTTATATTTTTCAGCAAATAAATCCTGAAGTCGCAGTTAAGGCTGCAGAAATTCAGGGTGGTGTCAGCAAGTATTTCCAGATTGAAAGGAGGGCTGGAGACCCTTCAGCCGTGGCTGGAGCTTCTATTCTGGCTTCCCTTTCTAGCCTAAGACCGGATCTTACAAGATGGAAGTCTCCATCTCAGACTGCCGGTAAACCTCATCAGGGTACTGATGTTCCTAGTCATTCTGTTCTCCCTGATGGTACAGAGACTGGGCTGGATGGTCTGGAAGGCAACTCTCCTCCAAATATAGCGACAGACAAAGCTGCTGATGTTGGAGCAAGCGACAAGAATTTGCCTATGGATTGCGATTCAGATGATGCTGGCACAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGCTTTCCTAGGGCCTTTCTTCAGGATTCTAGCTGGATCTACTTGTAAAGTGAAATTGAGCAAAAGTATCTTTAAACAGGTATTTGAAGAAAGACATGGGACGAGGGATGTGCAAGCTGCATCGACTTCTGGTACTTCTGTTCGCAGTGCAGTTTTTAAAGAGGATGTTCATGCTGCAATACTGGATAGGAATGAAATAGAAGTGTCCTTTGACAACTTCCCTTACTACTTAAGTGAGAATACAAAAAATGTTCTAATTGCAGCTTGCTTTATACACCTGAAGCATAGAGAACATGCAAAGTACACCACTGATCTTACAACAATAAACCCTCGTATTCTACTTTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCGAAACACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTCGCTTTTGGGTGGTTTAACTTCCAAGGAAGCTGAGCTGCTCAAAGATGGATTTAATGGTGATAAATCCTGTGGCTGTGCTAAACAAAGTCCTTTAACTACAGACATGGCTGGGAGCATGGATCCACCAGCTAGTGAACCAGAGACACAGAACTCCTCAAATGAACCTACTCCATGTGGCTTTGAGTCTCAACTTAAGTTTGAAACTGATAATTTACCATCTACATCTGGGGCAGCTAAAAACTGTGTCTTTAAACTAGGTGACAGGGTAAAATACAGTTCATCTTCTGGGGGAATATATCAGCTTCAGACAATTTCTACAAGGTACAGGGGTCCACCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATACCTGATGGAGTTGACCTTGGAGGTTGCTGTGAGGGTGGTCAAGGATTTTTCTGCCATGTGAATGATCTTCGGTTGGAAAACAGTGGCATTGAAGAACTTGACAAATTACTCATTAATACATTATTTGAGGTTGTGGTCAGTGAGAGCAGAAATGAACCCTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAACGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAATCTTCCGGACAATGTGGTGGTAATAGGTTCACATACTCACACTGACAGTCGCAAGGAGAAGTCACATCCTGGGGGTTTACTTTTTACGAAGTTTGGCAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCCGATAGTTTTGGAAGATTGCATGACAGGGGAAAGGAGGTCCCAAAGCCAAACAAAACATTAACTAAACTTTTCCCGAATAAAGTGACAATTCACATGCCTCAGGATGAAGTACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGATGTTGAGACTCTTAAAATTAAAGGAAATTTGCACAATTTACGTTCTGTTTTGAGCCGTTGTGGGGTGGAATGTGATGGGGTTGAATCCTTGTGCATTAAGGATCAAACGCTTAGTATTGAAAATGCAGAGAAGATTGTTGGTTGGGCTATAAGCCGACATCTCATGCAGAATGCTGAAACTGATCCTGATGCAAAACTTGTGTTGTCTTGTGAGAGCATCCAGTATGGAATTGGCATCTTACAGTCTATCCAGAATGAGTCAAAAAGCCTGAAGAAGTCTCTTAAGGATATTGTAACTGAAAATGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAACGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACATTGAAGGAATTGGTTATGCTTCCTTTACAGAGGCCTGAGTTATTTTGCAAAGGGCAATTAACCAAGCCATGCAAGGGCATTCTTTTATTTGGTCCTCCTGGAACAGGCAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAATTTTATCAACATTTCCATGTCCAGTATCACATCTAAGTGGTTTGGTGAGGGCGAAAAATATGTGAAAGCTGTTTTTTCCTTGGCAAATAAAATTGCTCCTAGCGTGATATTTGTTGACGAAGTTGATAGCATGTTGGGCAGGAGGGAAAATCCTGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAATTGGGATGGCTTACGCACAAAGGATACTGAGAGAGTTCTTGTTCTTGCAGCCACTAATAGGCCTTTTGACCTAGATGAAGCTGTCATAAGGAGGCTGCCTCGGAGGTTAATGGTAAATTTGCCAGATGCTCCAAATAGAGCCAAAATATTGAAAGTTATACTGGCAAAAGAAGATTTGTCTTCTGGTCTTGATTTGAATGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGACCTTAAGAATTTGTGTGTAACTGCTGCACACTGTCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAACGGGCTGCTGCTCTAGCAGAAGGTAGACCTGCTCCGGCAATAAGTGGAAGTGCAGATATCCGATCTTTAAACATGGAAGATTTCAAATATGCTCATCAACAGGTGTGTGCAAGCGTTTCCTCTGAATCCGTAAATATGACCGAGCTTCAACAATGGAATGAACTATACGGTGAAGGTGGTTCAAGAGTAAAAAGAACACTAAGCTATTTCATGTGA 3717 0.4342 MVSTRRNSGSFSNANKRPSSSEDKTPSPSPKRQKVDNVAAASEKPMPPAENSKDLGMTEPPADPGECESGDAQIAGDVNPDGKADPTPPIADGSTPTVVADKPRGSFSSWAIFQKQNPNFEASVPWCRLLSQSAQNPNVLICTPNFTIGSSRGCNFPLKDQTISGNLCKIKHTQREGSAVAVLESTGSKGSVVVNGTLVKKITSCVLNSGDEVVFGLIGNHSYIFQQINPEVAVKAAEIQGGVSKYFQIERRAGDPSAVAGASILASLSSLRPDLTRWKSPSQTAGKPHQGTDVPSHSVLPDGTETGLDGLEGNSPPNIATDKAADVGASDKNLPMDCDSDDAGTEAGNVKISGVNAFLGPFFRILAGSTCKVKLSKSIFKQVFEERHGTRDVQAASTSGTSVRSAVFKEDVHAAILDRNEIEVSFDNFPYYLSENTKNVLIAACFIHLKHREHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALAKHFGAKLLIFDSHSLLGGLTSKEAELLKDGFNGDKSCGCAKQSPLTTDMAGSMDPPASEPETQNSSNEPTPCGFESQLKFETDNLPSTSGAAKNCVFKLGDRVKYSSSSGGIYQLQTISTRYRGPPNGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGCCEGGQGFFCHVNDLRLENSGIEELDKLLINTLFEVVVSESRNEPFILFMKDAEKSIVGNGDPFSFKSRLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEVLLASWKQQLDRDVETLKIKGNLHNLRSVLSRCGVECDGVESLCIKDQTLSIENAEKIVGWAISRHLMQNAETDPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLANKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSGLDLNAIASMTDGYSGSDLKNLCVTAAHCPIKEILEKEKKERAAALAEGRPAPAISGSADIRSLNMEDFKYAHQQVCASVSSESVNMTELQQWNELYGEGGSRVKRTLSYFM 1238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01465 1238 CDD FHA 128 226 - -
Viun9g01465 1238 Gene3D - 932 1213 IPR027417 -
Viun9g01465 1238 Pfam AAA+ lid domain 1128 1162 IPR041569 -
Viun9g01465 1238 MobiDBLite consensus disorder prediction 276 291 - -
Viun9g01465 1238 Coils Coil 894 914 - -
Viun9g01465 1238 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 408 1237 - -
Viun9g01465 1238 Pfam FHA domain 147 216 IPR000253 GO:0005515
Viun9g01465 1238 CDD RecA-like_ATAD1 937 1103 - -
Viun9g01465 1238 MobiDBLite consensus disorder prediction 276 331 - -
Viun9g01465 1238 Pfam ATPase family associated with various cellular activities (AAA) 974 1103 IPR003959 GO:0005524|GO:0016887
Viun9g01465 1238 SUPERFAMILY SMAD/FHA domain 119 225 IPR008984 GO:0005515
Viun9g01465 1238 MobiDBLite consensus disorder prediction 1 26 - -
Viun9g01465 1238 Gene3D - 1106 1200 - -
Viun9g01465 1238 MobiDBLite consensus disorder prediction 1 100 - -
Viun9g01465 1238 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 933 1211 IPR027417 -
Viun9g01465 1238 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 932 1108 - -
Viun9g01465 1238 ProSitePatterns AAA-protein family signature. 1077 1096 IPR003960 GO:0005524|GO:0016887
Viun9g01465 1238 Gene3D - 125 233 - -
Viun9g01465 1238 SMART AAA_5 970 1107 IPR003593 GO:0016887
Viun9g01465 1238 MobiDBLite consensus disorder prediction 545 561 - -
Viun9g01465 1238 MobiDBLite consensus disorder prediction 533 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01465 Viun-Chr9 17452326 17464950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01465 933 1185 Calmodulin-binding Proteins AT3G56690 40.000 1.16e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01465 - - gmx:100780098 2176.36