Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01464 ATGGTTTCAACGAGACGCAACAGTGGATCTTTCTCTAACGCCAACAAGAGGCCGTCTTCGTCTGAAGACAAAACTCCCTCTCCTTCCCCCAAGCGCCAAAAGGTCGACAATGTTGCTGCCGCCTCGGAGAAACCGATGCCGCCGGCGGAAAATTCCAAGGATTTGGGCATGACGGAGCCTCCCGCTGATCCCGGAGAATGCGAATCTGGAGACGCTCAGATCGCCGGCGACGTCAATCCAGATGGCAAGGCCGACCCCACGCCGCCGATCGCTGATGGTTCTACACCGACTGTGGTTGCTGATAAACCTAGGGGTTCGTTCTCTTCTTGGGCTATATTTCAGAAGCAAAACCCGAATTTCGAGGCTTCAGTTCCCTGGTGCAGACTCTTGTCTCAATCTGCGCAGAATCCCAATGTTTTAATTTGCACACCCAACTTTACTATTGGGTCTAGTAGGGGTTGCAATTTCCCGTTGAAGGATCAGACTATTAGTGGAAATTTGTGTAAGATCAAGCACACGCAGCGCGAGGGAAGTGCTGTGGCCGTGCTAGAAAGTACGGGTAGCAAAGGATCGGTGGTAGTGAATGGCACGCTCGTCAAGAAGATTACCAGTTGTGTGCTTAACTCGGGGGACGAGGTGGTTTTTGGTTTGATTGGGAATCATTCTTATATTTTTCAGCAAATAAATCCTGAAGTCGCAGTTAAGGCTGCAGAAATTCAGGGTGGTGTCAGCAAGTATTTCCAGATTGAAAGGAGGGCTGGAGACCCTTCAGCCGTGGCTGGAGCTTCTATTCTGGCTTCCCTTTCTAGCCTAAGACCGGATCTTACAAGATGGAAGTCTCCATCTCAGACTGCCGGTAAACCTCATCAGGGTACTGATGTTCCTAGTCATTCTGTTCTCCCTGATGGTACAGAGACTGGGCTGGATGGTCTGGAAGGCAACTCTCCTCCAAATATAGCGACAGACAAAGCTGCTGATGTTGGAGCAAGCGACAAGAATTTGCCTATGGATTGCGATTCAGATGATGCTGGCACAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGCTTTCCTAGGGCCTTTCTTCAGGATTCTAGCTGGATCTACTTGTAAAGTGAAATTGAGCAAAAGTATCTTTAAACAGGTATTTGAAGAAAGACATGGGACGAGGGATGTGCAAGCTGCATCGACTTCTGGTACTTCTGTTCGCAGTGCAGTTTTTAAAGAGGATGTTCATGCTGCAATACTGGATAGGAATGAAATAGAAGTGTCCTTTGACAACTTCCCTTACTACTTAAGTGAGAATACAAAAAATGTTCTAATTGCAGCTTGCTTTATACACCTGAAGCATAGAGAACATGCAAAGTACACCACTGATCTTACAACAATAAACCCTCGTATTCTACTTTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCGAAACACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTCGCTTTTGGGTGGTTTAACTTCCAAGGAAGCTGAGCTGCTCAAAGATGGATTTAATGGTGATAAATCCTGTGGCTGTGCTAAACAAAGTCCTTTAACTACAGACATGGCTGGGAGCATGGATCCACCAGCTAGTGAACCAGAGACACAGAACTCCTCAAATGAACCTACTCCATGTGGCTTTGAGTCTCAACTTAAGTTTGAAACTGATAATTTACCATCTACATCTGGGGCAGCTAAAAACTGTGTCTTTAAACTAGGTGACAGGGTAAAATACAGTTCATCTTCTGGGGGAATATATCAGCTTCAGACAATTTCTACAAGCAATCGCATATACAGGGGTCCACCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATACCTGATGGAGTTGACCTTGGAGGTTGCTGTGAGGGTGGTCAAGGATTTTTCTGCCATGTGAATGATCTTCGGTTGGAAAACAGTGGCATTGAAGAACTTGACAAATTACTCATTAATACATTATTTGAGGTTGTGGTCAGTGAGAGCAGAAATGAACCCTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAACGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAATCTTCCGGACAATGTGGTGGTAATAGGTTCACATACTCACACTGACAGTCGCAAGGAGAAGTCACATCCTGGGGGTTTACTTTTTACGAAGTTTGGCAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCCGATAGTTTTGGAAGATTGCATGACAGGGGAAAGGAGGTCCCAAAGCCAAACAAAACATTAACTAAACTTTTCCCGAATAAAGTGACAATTCACATGCCTCAGGATGAAGTACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGATGTTGAGACTCTTAAAATTAAAGGAAATTTGCACAATTTACGTTCTGTTTTGAGCCGTTGTGGGGTGGAATGTGATGGGGTTGAATCCTTGTGCATTAAGGATCAAACGCTTAGTATTGAAAATGCAGAGAAGATTGTTGGTTGGGCTATAAGCCGACATCTCATGCAGAATGCTGAAACTGATCCTGATGCAAAACTTGTGTTGTCTTGTGAGAGCATCCAGTATGGAATTGGCATCTTACAGTCTATCCAGAATGAGTCAAAAAGCCTGAAGAAGTCTCTTAAGGATATTGTAACTGAAAATGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAACGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACATTGAAGGAATTGGTTATGCTTCCTTTACAGAGGCCTGAGTTATTTTGCAAAGGGCAATTAACCAAGCCATGCAAGGGCATTCTTTTATTTGGTCCTCCTGGAACAGGCAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAATTTTATCAACATTTCCATGTCCAGTATCACATCTAAGTGGTTTGGTGAGGGCGAAAAATATGTGAAAGCTGTTTTTTCCTTGGCAAATAAAATTGCTCCTAGCGTGATATTTGTTGACGAAGTTGATAGCATGTTGGGCAGGAGGGAAAATCCTGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAATTGGGATGGCTTACGCACAAAGGATACTGAGAGAGTTCTTGTTCTTGCAGCCACTAATAGGCCTTTTGACCTAGATGAAGCTGTCATAAGGAGGCTGCCTCGGAGGTTAATGGTAAATTTGCCAGATGCTCCAAATAGAGCCAAAATATTGAAAGTTATACTGGCAAAAGAAGATTTGTCTTCTGGTCTTGATTTGAATGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGACCTTAAGAATTTGTGTGTAACTGCTGCACACTGTCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAACGGGCTGCTGCTCTAGCAGAAGGTAGACCTGCTCCGGCAATAAGTGGAAGTGCAGATATCCGATCTTTAAACATGGAAGATTTCAAATATGCTCATCAACAGGTGTGTGCAAGCGTTTCCTCTGAATCCGTAAATATGACCGAGCTTCAACAATGGAATGAACTATACGGTGAAGGTGGTTCAAGAGTAAAAAGAACACTAAGCTATTTCATGTGA 3726 0.434 MVSTRRNSGSFSNANKRPSSSEDKTPSPSPKRQKVDNVAAASEKPMPPAENSKDLGMTEPPADPGECESGDAQIAGDVNPDGKADPTPPIADGSTPTVVADKPRGSFSSWAIFQKQNPNFEASVPWCRLLSQSAQNPNVLICTPNFTIGSSRGCNFPLKDQTISGNLCKIKHTQREGSAVAVLESTGSKGSVVVNGTLVKKITSCVLNSGDEVVFGLIGNHSYIFQQINPEVAVKAAEIQGGVSKYFQIERRAGDPSAVAGASILASLSSLRPDLTRWKSPSQTAGKPHQGTDVPSHSVLPDGTETGLDGLEGNSPPNIATDKAADVGASDKNLPMDCDSDDAGTEAGNVKISGVNAFLGPFFRILAGSTCKVKLSKSIFKQVFEERHGTRDVQAASTSGTSVRSAVFKEDVHAAILDRNEIEVSFDNFPYYLSENTKNVLIAACFIHLKHREHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALAKHFGAKLLIFDSHSLLGGLTSKEAELLKDGFNGDKSCGCAKQSPLTTDMAGSMDPPASEPETQNSSNEPTPCGFESQLKFETDNLPSTSGAAKNCVFKLGDRVKYSSSSGGIYQLQTISTSNRIYRGPPNGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGCCEGGQGFFCHVNDLRLENSGIEELDKLLINTLFEVVVSESRNEPFILFMKDAEKSIVGNGDPFSFKSRLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEVLLASWKQQLDRDVETLKIKGNLHNLRSVLSRCGVECDGVESLCIKDQTLSIENAEKIVGWAISRHLMQNAETDPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLANKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSGLDLNAIASMTDGYSGSDLKNLCVTAAHCPIKEILEKEKKERAAALAEGRPAPAISGSADIRSLNMEDFKYAHQQVCASVSSESVNMTELQQWNELYGEGGSRVKRTLSYFM 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01464 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 936 1214 IPR027417 -
Viun9g01464 1241 CDD FHA 128 226 - -
Viun9g01464 1241 SMART AAA_5 973 1110 IPR003593 GO:0016887
Viun9g01464 1241 MobiDBLite consensus disorder prediction 276 291 - -
Viun9g01464 1241 Pfam ATPase family associated with various cellular activities (AAA) 977 1106 IPR003959 GO:0005524|GO:0016887
Viun9g01464 1241 Pfam FHA domain 147 216 IPR000253 GO:0005515
Viun9g01464 1241 Gene3D - 125 233 - -
Viun9g01464 1241 MobiDBLite consensus disorder prediction 276 331 - -
Viun9g01464 1241 SUPERFAMILY SMAD/FHA domain 119 225 IPR008984 GO:0005515
Viun9g01464 1241 MobiDBLite consensus disorder prediction 1 26 - -
Viun9g01464 1241 CDD RecA-like_ATAD1 940 1106 - -
Viun9g01464 1241 MobiDBLite consensus disorder prediction 1 100 - -
Viun9g01464 1241 Gene3D - 935 1216 IPR027417 -
Viun9g01464 1241 Pfam AAA+ lid domain 1131 1165 IPR041569 -
Viun9g01464 1241 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 935 1111 - -
Viun9g01464 1241 Coils Coil 897 917 - -
Viun9g01464 1241 ProSitePatterns AAA-protein family signature. 1080 1099 IPR003960 GO:0005524|GO:0016887
Viun9g01464 1241 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 408 1240 - -
Viun9g01464 1241 MobiDBLite consensus disorder prediction 545 561 - -
Viun9g01464 1241 Gene3D - 1109 1203 - -
Viun9g01464 1241 MobiDBLite consensus disorder prediction 533 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01464 Viun-Chr9 17452326 17464950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01464 936 1188 Calmodulin-binding Proteins AT3G56690 40.000 1.27e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01464 - - gmx:100780098 2175.21