Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01463 ATGGTTTCAACGAGACGCAACAGTGGATCTTTCTCTAACGCCAACAAGAGGCCGTCTTCGTCTGAAGACAAAACTCCCTCTCCTTCCCCCAAGCGCCAAAAGGTCGACAATGTTGCTGCCGCCTCGGAGAAACCGATGCCGCCGGCGGAAAATTCCAAGGATTTGGGCATGACGGAGCCTCCCGCTGATCCCGGAGAATGCGAATCTGGAGACGCTCAGATCGCCGGCGACGTCAATCCAGATGGCAAGGCCGACCCCACGCCGCCGATCGCTGATGGTTCTACACCGACTGTGGTTGCTGATAAACCTAGGGGTTCGTTCTCTTCTTGGGCTATATTTCAGAAGCAAAACCCGAATTTCGAGGCTTCAGTTCCCTGGTGCAGACTCTTGTCTCAATCTGCGCAGAATCCCAATGTTTTAATTTGCACACCCAACTTTACTATTGGGTCTAGTAGGGGTTGCAATTTCCCGTTGAAGGATCAGACTATTAGTGGAAATTTGTGTAAGATCAAGCACACGCAGCGCGAGGGAAGTGCTGTGGCCGTGCTAGAAAGTACGGGTAGCAAAGGATCGGTGGTAGTGAATGGCACGCTCGTCAAGAAGATTACCAGTTGTGTGCTTAACTCGGGGGACGAGGTGGTTTTTGGTTTGATTGGGAATCATTCTTATATTTTTCAGCAAATAAATCCTGAAGTCGCAGTTAAGGCTGCAGAAATTCAGGGTGGTGTCAGCAAGTATTTCCAGATTGAAAGGAGGGCTGGAGACCCTTCAGCCGTGGCTGGAGCTTCTATTCTGGCTTCCCTTTCTAGCCTAAGACCGGATCTTACAAGATGGAAGTCTCCATCTCAGACTGCCGGTAAACCTCATCAGGGTACTGATGTTCCTAGTCATTCTGTTCTCCCTGATGGTACAGAGACTGGGCTGGATGGTCTGGAAGGCAACTCTCCTCCAAATATAGCGACAGACAAAGCTGCTGATGTTGGAGCAAGCGACAAGAATTTGCCTATGGATTGCGATTCAGATGATGCTGGCACAGAGGCAGGCAATGTAAAAATCTCTGGGGTGAATGCTTTCCTAGGGCCTTTCTTCAGGATTCTAGCTGGATCTACTTGTAAAGTGAAATTGAGCAAAAGTATCTTTAAACAGGTATTTGAAGAAAGACATGGGACGAGGGATGTGCAAGCTGCATCGACTTCTGGTACTTCTGTTCGCAGTGCAGTTTTTAAAGAGGATGTTCATGCTGCAATACTGGATAGGAATGAAATAGAAGTGTCCTTTGACAACTTCCCTTACTACTTAAGTGAGAATACAAAAAATGTTCTAATTGCAGCTTGCTTTATACACCTGAAGCATAGAGAACATGCAAAGTACACCACTGATCTTACAACAATAAACCCTCGTATTCTACTTTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCGAAACACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTCGCTTTTGGGTGGTTTAACTTCCAAGGAAGCTGAGCTGCTCAAAGATGGATTTAATGGTGATAAATCCTGTGGCTGTGCTAAACAAAGTCCTTTAACTACAGACATGGCTGGGAGCATGGATCCACCAGCTAGTGAACCAGAGACACAGAACTCCTCAAATGAACCTACTCCATGTGGCTTTGAGTCTCAACTTAAGTTTGAAACTGATAATTTACCATCTACATCTGGGGCAGCTAAAAACTGTGTCTTTAAACTAGGTGACAGGGTAAAATACAGTTCATCTTCTGGGGGAATATATCAGCTTCAGACAATTTCTACAAGGGGTCCACCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATACCTGATGGAGTTGACCTTGGAGGTTGCTGTGAGGGTGGTCAAGGATTTTTCTGCCATGTGAATGATCTTCGGTTGGAAAACAGTGGCATTGAAGAACTTGACAAATTACTCATTAATACATTATTTGAGGTTGTGGTCAGTGAGAGCAGAAATGAACCCTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAACGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAATCTTCCGGACAATGTGGTGGTAATAGGTTCACATACTCACACTGACAGTCGCAAGGAGAAGTCACATCCTGGGGGTTTACTTTTTACGAAGTTTGGCAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCCGATAGTTTTGGAAGATTGCATGACAGGGGAAAGGAGGTCCCAAAGCCAAACAAAACATTAACTAAACTTTTCCCGAATAAAGTGACAATTCACATGCCTCAGGATGAAGTACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGATGTTGAGACTCTTAAAATTAAAGGAAATTTGCACAATTTACGTTCTGTTTTGAGCCGTTGTGGGGTGGAATGTGATGGGGTTGAATCCTTGTGCATTAAGGATCAAACGCTTAGTATTGAAAATGCAGAGAAGATTGTTGGTTGGGCTATAAGCCGACATCTCATGCAGAATGCTGAAACTGATCCTGATGCAAAACTTGTGTTGTCTTGTGAGAGCATCCAGTATGGAATTGGCATCTTACAGTCTATCCAGAATGAGTCAAAAAGCCTGAAGAAGTCTCTTAAGGATATTGTAACTGAAAATGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAACGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACATTGAAGGAATTGGTTATGCTTCCTTTACAGAGGCCTGAGTTATTTTGCAAAGGGCAATTAACCAAGCCATGCAAGGGCATTCTTTTATTTGGTCCTCCTGGAACAGGCAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAATTTTATCAACATTTCCATGTCCAGTATCACATCTAAGTGGTTTGGTGAGGGCGAAAAATATGTGAAAGCTGTTTTTTCCTTGGCAAATAAAATTGCTCCTAGCGTGATATTTGTTGACGAAGTTGATAGCATGTTGGGCAGGAGGGAAAATCCTGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAATTGGGATGGCTTACGCACAAAGGATACTGAGAGAGTTCTTGTTCTTGCAGCCACTAATAGGCCTTTTGACCTAGATGAAGCTGTCATAAGGAGGCTGCCTCGGAGGTTAATGGTAAATTTGCCAGATGCTCCAAATAGAGCCAAAATATTGAAAGTTATACTGGCAAAAGAAGATTTGTCTTCTGGTCTTGATTTGAATGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGACCTTAAGAATTTGTGTGTAACTGCTGCACACTGTCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAACGGGCTGCTGCTCTAGCAGAAGGTAGACCTGCTCCGGCAATAAGTGGAAGTGCAGATATCCGATCTTTAAACATGGAAGATTTCAAATATGCTCATCAACAGGTGTGTGCAAGCGTTTCCTCTGAATCCGTAAATATGACCGAGCTTCAACAATGGAATGAACTATACGGTGAAGGTGGTTCAAGAGTAAAAAGAACACTAAGCTATTTCATGTGA 3711 0.4341 MVSTRRNSGSFSNANKRPSSSEDKTPSPSPKRQKVDNVAAASEKPMPPAENSKDLGMTEPPADPGECESGDAQIAGDVNPDGKADPTPPIADGSTPTVVADKPRGSFSSWAIFQKQNPNFEASVPWCRLLSQSAQNPNVLICTPNFTIGSSRGCNFPLKDQTISGNLCKIKHTQREGSAVAVLESTGSKGSVVVNGTLVKKITSCVLNSGDEVVFGLIGNHSYIFQQINPEVAVKAAEIQGGVSKYFQIERRAGDPSAVAGASILASLSSLRPDLTRWKSPSQTAGKPHQGTDVPSHSVLPDGTETGLDGLEGNSPPNIATDKAADVGASDKNLPMDCDSDDAGTEAGNVKISGVNAFLGPFFRILAGSTCKVKLSKSIFKQVFEERHGTRDVQAASTSGTSVRSAVFKEDVHAAILDRNEIEVSFDNFPYYLSENTKNVLIAACFIHLKHREHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALAKHFGAKLLIFDSHSLLGGLTSKEAELLKDGFNGDKSCGCAKQSPLTTDMAGSMDPPASEPETQNSSNEPTPCGFESQLKFETDNLPSTSGAAKNCVFKLGDRVKYSSSSGGIYQLQTISTRGPPNGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGCCEGGQGFFCHVNDLRLENSGIEELDKLLINTLFEVVVSESRNEPFILFMKDAEKSIVGNGDPFSFKSRLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEVLLASWKQQLDRDVETLKIKGNLHNLRSVLSRCGVECDGVESLCIKDQTLSIENAEKIVGWAISRHLMQNAETDPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLANKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSGLDLNAIASMTDGYSGSDLKNLCVTAAHCPIKEILEKEKKERAAALAEGRPAPAISGSADIRSLNMEDFKYAHQQVCASVSSESVNMTELQQWNELYGEGGSRVKRTLSYFM 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01463 1236 CDD FHA 128 226 - -
Viun9g01463 1236 MobiDBLite consensus disorder prediction 276 291 - -
Viun9g01463 1236 Pfam ATPase family associated with various cellular activities (AAA) 972 1101 IPR003959 GO:0005524|GO:0016887
Viun9g01463 1236 Gene3D - 1104 1198 - -
Viun9g01463 1236 Pfam FHA domain 147 216 IPR000253 GO:0005515
Viun9g01463 1236 ProSitePatterns AAA-protein family signature. 1075 1094 IPR003960 GO:0005524|GO:0016887
Viun9g01463 1236 MobiDBLite consensus disorder prediction 276 331 - -
Viun9g01463 1236 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 408 1235 - -
Viun9g01463 1236 Pfam AAA+ lid domain 1126 1160 IPR041569 -
Viun9g01463 1236 SUPERFAMILY SMAD/FHA domain 119 225 IPR008984 GO:0005515
Viun9g01463 1236 MobiDBLite consensus disorder prediction 1 26 - -
Viun9g01463 1236 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 930 1106 - -
Viun9g01463 1236 SMART AAA_5 968 1105 IPR003593 GO:0016887
Viun9g01463 1236 MobiDBLite consensus disorder prediction 1 100 - -
Viun9g01463 1236 Coils Coil 892 912 - -
Viun9g01463 1236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 931 1209 IPR027417 -
Viun9g01463 1236 Gene3D - 125 233 - -
Viun9g01463 1236 CDD RecA-like_ATAD1 935 1101 - -
Viun9g01463 1236 Gene3D - 930 1211 IPR027417 -
Viun9g01463 1236 MobiDBLite consensus disorder prediction 545 561 - -
Viun9g01463 1236 MobiDBLite consensus disorder prediction 533 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01463 Viun-Chr9 17452326 17464950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01463 931 1183 Calmodulin-binding Proteins AT3G56690 40.000 1.10e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01463 - - gmx:100780098 2181.37