Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01461 ATGGTTTCAACGAGACGCAACAGTGGATCTTTCTCTAACGCCAACAAGAGGCCGTCTTCGTCTGAAGACAAAACTCCCTCTCCTTCCCCCAAGCGCCAAAAGGTCGACAATGTTGCTGCCGCCTCGGAGAAACCGATGCCGCCGGCGGAAAATTCCAAGGATTTGGGCATGACGGAGCCTCCCGCTGATCCCGGAGAATGCGAATCTGGAGACGCTCAGATCGCCGGCGACGTCAATCCAGATGGCAAGGCCGACCCCACGCCGCCGATCGCTGATGGTTCTACACCGACTGTGGTTGCTGATAAACCTAGGGGTTCGTTCTCTTCTTGGGCTATATTTCAGAAGCAAAACCCGAATTTCGAGGCTTCAGTTCCCTGGTGCAGACTCTTGTCTCAATCTGCGCAGAATCCCAATGTTTTAATTTGCACACCCAACTTTACTATTGGGTCTAGTAGGGGTTGCAATTTCCCGTTGAAGGATCAGACTATTAGTGGAAATTTGTGTAAGATCAAGCACACGCAGCGCGAGGGAAGTGCTGTGGCCGTGCTAGAAAGTACGGGTAGCAAAGGATCGGTGGTAGTGAATGGCACGCTCGTCAAGAAGATTACCAGTTGTGTGCTTAACTCGGGGGACGAGGTGGTTTTTGGTTTGATTGGGAATCATTCTTATATTTTTCAGCAAATAAATCCTGAAGTCGCAGTTAAGGCTGCAGAAATTCAGGGTGGTGTCAGCAAGTATTTCCAGATTGAAAGGAGGGCTGGAGACCCTTCAGCCGTGGCTGGAGCTTCTATTCTGGCTTCCCTTTCTAGCCTAAGACCGGATCTTACAAGATGGAAGTCTCCATCTCAGACTGCCGGTAAACCTCATCAGGGTACTGATGTTCCTAGTCATTCTGTTCTCCCTGATGGTACAGAGACTGGGCTGGATGGTCTGGAAGGCAACTCTCCTCCAAATATAGCGACAGACAAAGCTGCTGATGTTGGAGCAAGCGACAAGAATTTGCCTATGGATTGCGATTCAGATGATGCTGGCACAGAGGCAGGCAATGTATTTGAAGAAAGACATGGGACGAGGGATGTGCAAGCTGCATCGACTTCTGGTACTTCTGTTCGCAGTGCAGTTTTTAAAGAGGATGTTCATGCTGCAATACTGGATAGGAATGAAATAGAAGTGTCCTTTGACAACTTCCCTTACTACTTAAGTGAGAATACAAAAAATGTTCTAATTGCAGCTTGCTTTATACACCTGAAGCATAGAGAACATGCAAAGTACACCACTGATCTTACAACAATAAACCCTCGTATTCTACTTTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGTTGGCAAAAGCACTTGCGAAACACTTTGGAGCTAAATTGCTCATATTTGATAGCCATTCGCTTTTGGGTGGTTTAACTTCCAAGGAAGCTGAGCTGCTCAAAGATGGATTTAATGGTGATAAATCCTGTGGCTGTGCTAAACAAAGTCCTTTAACTACAGACATGGCTGGGAGCATGGATCCACCAGCTAGTGAACCAGAGACACAGAACTCCTCAAATGAACCTACTCCATGTGGCTTTGAGTCTCAACTTAAGTTTGAAACTGATAATTTACCATCTACATCTGGGGCAGCTAAAAACTGTGTCTTTAAACTAGGTGACAGGGTAAAATACAGTTCATCTTCTGGGGGAATATATCAGCTTCAGACAATTTCTACAAGGTACAGCAATCGCATATACAGGGGTCCACCTAATGGAAGTCGGGGGAAGGTTGTCTTACTTTTTGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCCATACCTGATGGAGTTGACCTTGGAGGTTGCTGTGAGGGTGGTCAAGGATTTTTCTGCCATGTGAATGATCTTCGGTTGGAAAACAGTGGCATTGAAGAACTTGACAAATTACTCATTAATACATTATTTGAGGTTGTGGTCAGTGAGAGCAGAAATGAACCCTTCATTTTGTTCATGAAAGATGCAGAGAAGTCTATAGTAGGAAACGGAGATCCATTTTCATTTAAAAGTAGGCTTGAAAATCTTCCGGACAATGTGGTGGTAATAGGTTCACATACTCACACTGACAGTCGCAAGGAGAAGTCACATCCTGGGGGTTTACTTTTTACGAAGTTTGGCAGTAATCAGACTGCTCTTCTTGATTTGGCTTTCCCCGATAGTTTTGGAAGATTGCATGACAGGGGAAAGGAGGTCCCAAAGCCAAACAAAACATTAACTAAACTTTTCCCGAATAAAGTGACAATTCACATGCCTCAGGATGAAGTACTTCTAGCATCTTGGAAGCAGCAACTTGATCGAGATGTTGAGACTCTTAAAATTAAAGGAAATTTGCACAATTTACGTTCTGTTTTGAGCCGTTGTGGGGTGGAATGTGATGGGGTTGAATCCTTGTGCATTAAGGATCAAACGCTTAGTATTGAAAATGCAGAGAAGATTGTTGGTTGGGCTATAAGCCGACATCTCATGCAGAATGCTGAAACTGATCCTGATGCAAAACTTGTGTTGTCTTGTGAGAGCATCCAGTATGGAATTGGCATCTTACAGTCTATCCAGAATGAGTCAAAAAGCCTGAAGAAGTCTCTTAAGGATATTGTAACTGAAAATGAGTTTGAAAAGAGGCTTTTGGCTGATGTTATTCCACCTAACGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACATTGAAGGAATTGGTTATGCTTCCTTTACAGAGGCCTGAGTTATTTTGCAAAGGGCAATTAACCAAGCCATGCAAGGGCATTCTTTTATTTGGTCCTCCTGGAACAGGCAAGACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAATTTTATCAACATTTCCATGTCCAGTATCACATCTAAGTGGTTTGGTGAGGGCGAAAAATATGTGAAAGCTGTTTTTTCCTTGGCAAATAAAATTGCTCCTAGCGTGATATTTGTTGACGAAGTTGATAGCATGTTGGGCAGGAGGGAAAATCCTGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAATTGGGATGGCTTACGCACAAAGGATACTGAGAGAGTTCTTGTTCTTGCAGCCACTAATAGGCCTTTTGACCTAGATGAAGCTGTCATAAGGAGGCTGCCTCGGAGGTTAATGGTAAATTTGCCAGATGCTCCAAATAGAGCCAAAATATTGAAAGTTATACTGGCAAAAGAAGATTTGTCTTCTGGTCTTGATTTGAATGCAATTGCAAGTATGACTGATGGATATTCCGGAAGTGACCTTAAGAATTTGTGTGTAACTGCTGCACACTGTCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAACGGGCTGCTGCTCTAGCAGAAGGTAGACCTGCTCCGGCAATAAGTGGAAGTGCAGATATCCGATCTTTAAACATGGAAGATTTCAAATATGCTCATCAACAGGTGTGTGCAAGCGTTTCCTCTGAATCCGTAAATATGACCGAGCTTCAACAATGGAATGAACTATACGGTGAAGGTGGTTCAAGAGTAAAAAGAACACTAAGCTATTTCATGTGA 3633 0.4355 MVSTRRNSGSFSNANKRPSSSEDKTPSPSPKRQKVDNVAAASEKPMPPAENSKDLGMTEPPADPGECESGDAQIAGDVNPDGKADPTPPIADGSTPTVVADKPRGSFSSWAIFQKQNPNFEASVPWCRLLSQSAQNPNVLICTPNFTIGSSRGCNFPLKDQTISGNLCKIKHTQREGSAVAVLESTGSKGSVVVNGTLVKKITSCVLNSGDEVVFGLIGNHSYIFQQINPEVAVKAAEIQGGVSKYFQIERRAGDPSAVAGASILASLSSLRPDLTRWKSPSQTAGKPHQGTDVPSHSVLPDGTETGLDGLEGNSPPNIATDKAADVGASDKNLPMDCDSDDAGTEAGNVFEERHGTRDVQAASTSGTSVRSAVFKEDVHAAILDRNEIEVSFDNFPYYLSENTKNVLIAACFIHLKHREHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALAKHFGAKLLIFDSHSLLGGLTSKEAELLKDGFNGDKSCGCAKQSPLTTDMAGSMDPPASEPETQNSSNEPTPCGFESQLKFETDNLPSTSGAAKNCVFKLGDRVKYSSSSGGIYQLQTISTRYSNRIYRGPPNGSRGKVVLLFDDNPLSKIGVRFDKPIPDGVDLGGCCEGGQGFFCHVNDLRLENSGIEELDKLLINTLFEVVVSESRNEPFILFMKDAEKSIVGNGDPFSFKSRLENLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEVLLASWKQQLDRDVETLKIKGNLHNLRSVLSRCGVECDGVESLCIKDQTLSIENAEKIVGWAISRHLMQNAETDPDAKLVLSCESIQYGIGILQSIQNESKSLKKSLKDIVTENEFEKRLLADVIPPNDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLANKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSGLDLNAIASMTDGYSGSDLKNLCVTAAHCPIKEILEKEKKERAAALAEGRPAPAISGSADIRSLNMEDFKYAHQQVCASVSSESVNMTELQQWNELYGEGGSRVKRTLSYFM 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01461 1210 CDD FHA 128 226 - -
Viun9g01461 1210 Pfam AAA+ lid domain 1100 1134 IPR041569 -
Viun9g01461 1210 MobiDBLite consensus disorder prediction 276 291 - -
Viun9g01461 1210 MobiDBLite consensus disorder prediction 500 531 - -
Viun9g01461 1210 MobiDBLite consensus disorder prediction 512 528 - -
Viun9g01461 1210 ProSitePatterns AAA-protein family signature. 1049 1068 IPR003960 GO:0005524|GO:0016887
Viun9g01461 1210 Gene3D - 125 233 - -
Viun9g01461 1210 Pfam FHA domain 147 216 IPR000253 GO:0005515
Viun9g01461 1210 CDD RecA-like_ATAD1 909 1075 - -
Viun9g01461 1210 SUPERFAMILY SMAD/FHA domain 119 225 IPR008984 GO:0005515
Viun9g01461 1210 Gene3D - 904 1185 IPR027417 -
Viun9g01461 1210 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 375 1209 - -
Viun9g01461 1210 MobiDBLite consensus disorder prediction 1 26 - -
Viun9g01461 1210 Pfam ATPase family associated with various cellular activities (AAA) 946 1075 IPR003959 GO:0005524|GO:0016887
Viun9g01461 1210 MobiDBLite consensus disorder prediction 1 100 - -
Viun9g01461 1210 SMART AAA_5 942 1079 IPR003593 GO:0016887
Viun9g01461 1210 MobiDBLite consensus disorder prediction 276 332 - -
Viun9g01461 1210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 905 1183 IPR027417 -
Viun9g01461 1210 Coils Coil 866 886 - -
Viun9g01461 1210 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 904 1080 - -
Viun9g01461 1210 Gene3D - 1078 1172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01461 Viun-Chr9 17452326 17464950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01461 905 1157 Calmodulin-binding Proteins AT3G56690 40.000 1.02e-41 164