Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun9g01457 | ATGGCTGCTCTCACCTCTCTCTCCCTCTCTCTCCGTCTCTCTCTCCGCCGCAAACCAACCGCAACAACCTCCGCTTCACTTTCTTCACTCCCAGGGAGCACCCATGGGTCTACAACCAAAGCGCCTCGCAGAAGAACTAGGCGAATCGAAGGCCCTAGAAAAAGCATGGAGGACTCGGTTCAACGCAAGATGGAGCAGTTTTACGAAGGCTCCGATGGGCCTCCGCTTCGCGTTCTTCCCATTGGTGGTTTGGGGGAGATTGGGATGAACTGCATGCTCGTCGGCAACCACGACCGCTATATCCTCATCGACGCCGGTGTCATGTTTCCAGACTATGACGAGCTTGGAGTTCAGAAGATTATACCTGACACCACGTTTATAAGAAAGTGGAGCCACAAAATTGAGGCGCTTGTCATAACACACGGTCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATCCCGGCATTGGATTCCAATACACCAATTTTTTCATCTTCCTTTACAAAGGAGCTTATAAACAAACGTTTGAAGGAACATGGTATTTTTGTTCCATCTAGACTCAAAGTATTTAAAATGAGGAAAAAGTTTGTGGCTGGGCCATTTGAAATAGAGCCTATCAGGGTGACCCATTCGATTCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATTGATGAGACACCATTAGATGGGAATGTTTTTGATCGTGAAGCTTTAGAGGAACTCTCTAAAGAGGGAGTAACATTGATGATGAGTGATTCAACAAATGTACTCTCACCTGGTAGGACAATTAGTGAATCAGTTGTGGCAGATGCATTGTTGCGACATATTTCAGCTTCTAATGGAAGGGTCATCACCACCCAATTTGCATCCAATTTACATCGGCTTGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCAGAAAGTTGGTATTTGTTGGCATGTCCTTAAGGACATATTTAGATGCAGCTTGGAAGGATGGAAAGGCTCCAATTGATCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGTTCTCAAGCAGAACCTCGTGCTGCTTTGAACCTTGCATCGTATGGAAGTAGTCATGCTTTCAAACTAACCAAGGAAGATCTTGTTTTGTATTCAGCTAAGGTTATCCCTGGTAACGAGTCTCGTGTGATGAAAATGCTAAACCGTATATCGGAAATTGGATCAACTATAGTTATGGGAAAAAATGAAGGTCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAAGAAGTACTTAGAATAGTGAAGCCACAACATTTTCTTCCCATACATGGAGAACTTTTGTTCCTGAAGGAACATGAATTACTGGGAAAATCAACTGGCATTCGGCACACTGCTGTCATTAAGAATGGAGAGATGCTTGGTGTTACACATTTGAGAAATAGAAAAGTCCTTTCTAATGGTTTCATTTCTCTTGGAAAAGAGAATTTACAGTTGAAATATAGTGATGGAGATAGAGCATTTGGCACATCAAATGAACTTTTCATTGATGAAAGATTGAGAATCGCATTAGATGGCATCATTGTTTCTAGCATGGAAATATTTCGCCCCAAAGTTTTAGGTAGTTTGGCTTCAAATACCTTAAAAGGGAAGATAAGGATTACCACAAGATGCTTATGGCTCGACAAAGGAAAGTTGATGGATGCACTCTATAAATCAGCCCATGCTGCTCTTTCAAGCTGCCCTGTAAATAGTCCTCTGGCTCACATAGAAAGAACTGTGTCTGAGGTATTGAGAAAGATGGTGAGGAAGTATAGTGGTAAACGGCCTGAAGTTATTGCCATTGCTATAGAAAATCCTGCATCCACTATTACAGATGAGATAAACGCAAAATTGTCTGGCAAAACCCATGCGGGTCTTGGAATATCAACAGCAAAAAGAGCAGTGGATAGACACGAGAAAGGAAATCAGCCCACCTCACTGCAAATTACAGATGATAGTATTGATAATGCAAGTGGTGCTGAGGGTTATTTATCTGAGGAAGACAACACTGCAAGCGGAGCTGAGGGTGATTTATCCGAATCAGAGGATTCAGATGAGTTTTGGAAACCATTCGTTACACCATTACCTGTCAAGAAGCCTTTGGGTGCTGACAATGCTTATGATGCACAAAAGGAGCATGAGTCCAATCTGAAGAAAGATGATTCTAAGATCATTGATGAAGCAAAGTCTGAAGAAATATCTACTTCTGAACCCAAGTCTTCAAAATCAGTAAAGAGAAATAAATGGAAAACTGATGAAGTTAAGAAGCTGATTGGTATGCGTGAGGAACTACGTGACAGATTTCAAGTTGTGAGGGGAAGGATGGCCCTCTGGGAAGAGATATCTCAAAAATTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAGTGCAAATCTTTGTGGACATCTTTGGTACTTAAATATGAGGGGATCAAGAATGAGAAGGATAGCAAGAAAAGTTGGCCATATATAGAGGACATGGAAAGGATAATGTCTGATAAAGAAGCTCCTGCAACAAAATGA | 2613 | 0.4237 | MAALTSLSLSLRLSLRRKPTATTSASLSSLPGSTHGSTTKAPRRRTRRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFSSSFTKELINKRLKEHGIFVPSRLKVFKMRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGNVFDREALEELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRHISASNGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDLVLYSAKVIPGNESRVMKMLNRISEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVTHLRNRKVLSNGFISLGKENLQLKYSDGDRAFGTSNELFIDERLRIALDGIIVSSMEIFRPKVLGSLASNTLKGKIRITTRCLWLDKGKLMDALYKSAHAALSSCPVNSPLAHIERTVSEVLRKMVRKYSGKRPEVIAIAIENPASTITDEINAKLSGKTHAGLGISTAKRAVDRHEKGNQPTSLQITDDSIDNASGAEGYLSEEDNTASGAEGDLSESEDSDEFWKPFVTPLPVKKPLGADNAYDAQKEHESNLKKDDSKIIDEAKSEEISTSEPKSSKSVKRNKWKTDEVKKLIGMREELRDRFQVVRGRMALWEEISQKLLADGISRSPGQCKSLWTSLVLKYEGIKNEKDSKKSWPYIEDMERIMSDKEAPATK | 870 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun9g01457 | 870 | SUPERFAMILY | Metallo-hydrolase/oxidoreductase | 76 | 490 | IPR036866 | - | |
Viun9g01457 | 870 | Gene3D | - | 80 | 492 | IPR036866 | - | |
Viun9g01457 | 870 | SMART | Lactamase_B_5a | 88 | 285 | IPR001279 | - | |
Viun9g01457 | 870 | Gene3D | - | 779 | 839 | - | - | |
Viun9g01457 | 870 | MobiDBLite | consensus disorder prediction | 738 | 777 | - | - | |
Viun9g01457 | 870 | Pfam | Metallo-beta-lactamase superfamily | 89 | 233 | IPR001279 | - | |
Viun9g01457 | 870 | CDD | GT1 | 777 | 842 | - | - | |
Viun9g01457 | 870 | MobiDBLite | consensus disorder prediction | 17 | 60 | - | - | |
Viun9g01457 | 870 | Gene3D | - | 277 | 427 | IPR042173 | - | |
Viun9g01457 | 870 | PANTHER | RIBONUCLEASE J | 1 | 870 | - | - | |
Viun9g01457 | 870 | ProSiteProfiles | Myb-like domain profile. | 771 | 835 | IPR001005 | - | |
Viun9g01457 | 870 | MobiDBLite | consensus disorder prediction | 662 | 715 | - | - | |
Viun9g01457 | 870 | MobiDBLite | consensus disorder prediction | 671 | 685 | - | - | |
Viun9g01457 | 870 | Pfam | Myb/SANT-like DNA-binding domain | 776 | 860 | IPR044822 | - | |
Viun9g01457 | 870 | CDD | RNaseJ_MBL-fold | 79 | 490 | - | - | |
Viun9g01457 | 870 | MobiDBLite | consensus disorder prediction | 17 | 39 | - | - | |
Viun9g01457 | 870 | Pfam | Zn-dependent metallo-hydrolase RNA specificity domain | 433 | 470 | IPR011108 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun9g01457 | Viun-Chr9 | 17402265 | 17417008 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun9g01457 | 778 | 864 | Trihelix Transcription Factor Family | AT2G38250 | 33.708 | 1.99e-10 | 60.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Trihelix | Viun9g01457 | Lactamase_B | 5.2e-09 | CL0381 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun9g01457 | - | - | gmx:100783850 | 1513.43 |