Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01457 ATGGCTGCTCTCACCTCTCTCTCCCTCTCTCTCCGTCTCTCTCTCCGCCGCAAACCAACCGCAACAACCTCCGCTTCACTTTCTTCACTCCCAGGGAGCACCCATGGGTCTACAACCAAAGCGCCTCGCAGAAGAACTAGGCGAATCGAAGGCCCTAGAAAAAGCATGGAGGACTCGGTTCAACGCAAGATGGAGCAGTTTTACGAAGGCTCCGATGGGCCTCCGCTTCGCGTTCTTCCCATTGGTGGTTTGGGGGAGATTGGGATGAACTGCATGCTCGTCGGCAACCACGACCGCTATATCCTCATCGACGCCGGTGTCATGTTTCCAGACTATGACGAGCTTGGAGTTCAGAAGATTATACCTGACACCACGTTTATAAGAAAGTGGAGCCACAAAATTGAGGCGCTTGTCATAACACACGGTCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATCCCGGCATTGGATTCCAATACACCAATTTTTTCATCTTCCTTTACAAAGGAGCTTATAAACAAACGTTTGAAGGAACATGGTATTTTTGTTCCATCTAGACTCAAAGTATTTAAAATGAGGAAAAAGTTTGTGGCTGGGCCATTTGAAATAGAGCCTATCAGGGTGACCCATTCGATTCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCACACTGGGGACTGGAAGATTGATGAGACACCATTAGATGGGAATGTTTTTGATCGTGAAGCTTTAGAGGAACTCTCTAAAGAGGGAGTAACATTGATGATGAGTGATTCAACAAATGTACTCTCACCTGGTAGGACAATTAGTGAATCAGTTGTGGCAGATGCATTGTTGCGACATATTTCAGCTTCTAATGGAAGGGTCATCACCACCCAATTTGCATCCAATTTACATCGGCTTGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGCAGAAAGTTGGTATTTGTTGGCATGTCCTTAAGGACATATTTAGATGCAGCTTGGAAGGATGGAAAGGCTCCAATTGATCCATCCACTCTGGTGAAAGCAGAGGATATTGATGCTTATGCTCCAAAGGATCTGCTAATTGTAACAACAGGTTCTCAAGCAGAACCTCGTGCTGCTTTGAACCTTGCATCGTATGGAAGTAGTCATGCTTTCAAACTAACCAAGGAAGATCTTGTTTTGTATTCAGCTAAGGTTATCCCTGGTAACGAGTCTCGTGTGATGAAAATGCTAAACCGTATATCGGAAATTGGATCAACTATAGTTATGGGAAAAAATGAAGGTCTGCACACATCTGGTCATGCATATCGTGGAGAATTGGAAGAAGTACTTAGAATAGTGAAGCCACAACATTTTCTTCCCATACATGGAGAACTTTTGTTCCTGAAGGAACATGAATTACTGGGAAAATCAACTGGCATTCGGCACACTGCTGTCATTAAGAATGGAGAGATGCTTGGTGTTACACATTTGAGAAATAGAAAAGTCCTTTCTAATGGTTTCATTTCTCTTGGAAAAGAGAATTTACAGTTGAAATATAGTGATGGAGATAGAGCATTTGGCACATCAAATGAACTTTTCATTGATGAAAGATTGAGAATCGCATTAGATGGCATCATTGTTTCTAGCATGGAAATATTTCGCCCCAAAGTTTTAGGTAGTTTGGCTTCAAATACCTTAAAAGGGAAGATAAGGATTACCACAAGATGCTTATGGCTCGACAAAGGAAAGTTGATGGATGCACTCTATAAATCAGCCCATGCTGCTCTTTCAAGCTGCCCTGTAAATAGTCCTCTGGCTCACATAGAAAGAACTGTGTCTGAGGTATTGAGAAAGATGGTGAGGAAGTATAGTGGTAAACGGCCTGAAGTTATTGCCATTGCTATAGAAAATCCTGCATCCACTATTACAGATGAGATAAACGCAAAATTGTCTGGCAAAACCCATGCGGGTCTTGGAATATCAACAGCAAAAAGAGCAGTGGATAGACACGAGAAAGGAAATCAGCCCACCTCACTGCAAATTACAGATGATAGTATTGATAATGCAAGTGGTGCTGAGGGTTATTTATCTGAGGAAGACAACACTGCAAGCGGAGCTGAGGGTGATTTATCCGAATCAGAGGATTCAGATGAGTTTTGGAAACCATTCGTTACACCATTACCTGTCAAGAAGCCTTTGGGTGCTGACAATGCTTATGATGCACAAAAGGAGCATGAGTCCAATCTGAAGAAAGATGATTCTAAGATCATTGATGAAGCAAAGTCTGAAGAAATATCTACTTCTGAACCCAAGTCTTCAAAATCAGTAAAGAGAAATAAATGGAAAACTGATGAAGTTAAGAAGCTGATTGGTATGCGTGAGGAACTACGTGACAGATTTCAAGTTGTGAGGGGAAGGATGGCCCTCTGGGAAGAGATATCTCAAAAATTGTTGGCTGATGGGATCAGCAGAAGTCCTGGACAGTGCAAATCTTTGTGGACATCTTTGGTACTTAAATATGAGGGGATCAAGAATGAGAAGGATAGCAAGAAAAGTTGGCCATATATAGAGGACATGGAAAGGATAATGTCTGATAAAGAAGCTCCTGCAACAAAATGA 2613 0.4237 MAALTSLSLSLRLSLRRKPTATTSASLSSLPGSTHGSTTKAPRRRTRRIEGPRKSMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFSSSFTKELINKRLKEHGIFVPSRLKVFKMRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGNVFDREALEELSKEGVTLMMSDSTNVLSPGRTISESVVADALLRHISASNGRVITTQFASNLHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPIDPSTLVKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLTKEDLVLYSAKVIPGNESRVMKMLNRISEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVTHLRNRKVLSNGFISLGKENLQLKYSDGDRAFGTSNELFIDERLRIALDGIIVSSMEIFRPKVLGSLASNTLKGKIRITTRCLWLDKGKLMDALYKSAHAALSSCPVNSPLAHIERTVSEVLRKMVRKYSGKRPEVIAIAIENPASTITDEINAKLSGKTHAGLGISTAKRAVDRHEKGNQPTSLQITDDSIDNASGAEGYLSEEDNTASGAEGDLSESEDSDEFWKPFVTPLPVKKPLGADNAYDAQKEHESNLKKDDSKIIDEAKSEEISTSEPKSSKSVKRNKWKTDEVKKLIGMREELRDRFQVVRGRMALWEEISQKLLADGISRSPGQCKSLWTSLVLKYEGIKNEKDSKKSWPYIEDMERIMSDKEAPATK 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01457 870 SUPERFAMILY Metallo-hydrolase/oxidoreductase 76 490 IPR036866 -
Viun9g01457 870 Gene3D - 80 492 IPR036866 -
Viun9g01457 870 SMART Lactamase_B_5a 88 285 IPR001279 -
Viun9g01457 870 Gene3D - 779 839 - -
Viun9g01457 870 MobiDBLite consensus disorder prediction 738 777 - -
Viun9g01457 870 Pfam Metallo-beta-lactamase superfamily 89 233 IPR001279 -
Viun9g01457 870 CDD GT1 777 842 - -
Viun9g01457 870 MobiDBLite consensus disorder prediction 17 60 - -
Viun9g01457 870 Gene3D - 277 427 IPR042173 -
Viun9g01457 870 PANTHER RIBONUCLEASE J 1 870 - -
Viun9g01457 870 ProSiteProfiles Myb-like domain profile. 771 835 IPR001005 -
Viun9g01457 870 MobiDBLite consensus disorder prediction 662 715 - -
Viun9g01457 870 MobiDBLite consensus disorder prediction 671 685 - -
Viun9g01457 870 Pfam Myb/SANT-like DNA-binding domain 776 860 IPR044822 -
Viun9g01457 870 CDD RNaseJ_MBL-fold 79 490 - -
Viun9g01457 870 MobiDBLite consensus disorder prediction 17 39 - -
Viun9g01457 870 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 433 470 IPR011108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01457 Viun-Chr9 17402265 17417008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01457 778 864 Trihelix Transcription Factor Family AT2G38250 33.708 1.99e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun9g01457 Lactamase_B 5.2e-09 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01457 - - gmx:100783850 1513.43