Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01449 ATGGCCACCCAAAACCAAAAACACTCTCTTCCAAACACCACCATCGACCCAAACACCGGTTTCTGTTCTTCTTCTAGAATCTTCCACAGCCTCCGTCCAAACGTCCCCCTCCCTCCGCCGTCTCAGCCGCTCTCCCTCACCGATTACGCCCTCTCCCTCCTCCCCGCCGCCGCCACCGCCACTGATAAATCCGCCATCATCGACGCCACAACCGGCCGCCACCTCTCCTACTCCCTCTTCCTCCGCCAAGTGAAATCCCTCGCCTCCTCCATCCAATCTCTCACCCCTCTCTCCAAAGGCCACGTGGCACTAATCCTCACTCCAACCTCCGTGCACGTTCCCGTACTATACTTCTCTCTCCTCTCGCTCGGGGTCACAGTCGCACCTGCCAACCCGCTCAGTTCCCCTTCCGAGTTGACTCACCTCGTCCGACTCACAAAACCCGCCATCGCCTTCGTCACCTCCGCCGTCGCCTCAAACATCCCCGCCCTCAAATTCGGCACTGTTCTCACCGACTCCCCGCTCTTCCTCTCCATGCTCGACGCCAACGTAGACTCACACTCACGCGCTCCCGGAGTCGAAGTGAGTCAGTCCGACTCCGCCGCAATTCTCTTCTCCTCCGGCACCACCGGGCGCGTGAAGGGCGTGTTCCTCACCCACCGGAACTTCATTGCAGTCACAGCAGGGTACTATCAGCTGAGGACCATCCAGCAAGATGCCGACGAAGCGGAACCGCACCCCGTGTCACTGTTCACACTGCCGCTGTTCCACGTGTTCGGGTTCTTCATGCTGGTCAGGTGCATCTCTTTGGGGGAGACGCTCGTTCTGATGCAGAGATTCGATTTCGAAGGGATGCTCAAAGCCGTGGAGAGGTATAAAATCTCAATGATGCCGGTGTCGCCGCCGCTCGTGGTGGCCCTCGCCAAGTCGGAGCTCGTGAACAAGTACGACCTGAGCTCGCTCCGGATTATAGGTTGCGGCGGCGCGCCGCTCGGCGAGCATGTCGCCGATGACTTCAAAGCCAAATTCCCCAACGTGGAAATTTCCCAGGGCTATGGTCTTACTGAAAGTGGAGGAGCAGCAGCTAGAACATTTGGTCCTGAGGAGTTTAAGCGCCATGGTTCTGTGGGTCGACTGTCAGAAAACATGGAGGCCAAGATAGTGGACCCTGTAACTGGAGAGGCATTACCTCCTTGCCAAAAAGGGGAACTGTGGATTCGAGGTCCATCAATCATGAAAGGTTATGTAGGAGATGAGAAGGCGTCAGCTGAAACACTGGATTCAGGGGGATGGCTGAAGACAGGCGATCTTTGTTATTTTGACTCTGAGGGTTTCCTCTACATTGTAGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACACATACTTCTCACCAATCCTGAAATTGCTGATGCTGCAGTAATTCCGTACCCTAATGAAGAAGCAGGACAGATTCCTATGGCCTTTGTAGTAAGAAAACCTGGAAGCAACATTTCTGCAGATCAGATTATGGAGTTTGTGGCAAAGCAGGTTTCTCCTTACAAGAAGATACGGCGTGTATGTTTTGTCAATTCTATCCCAAAATCTCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTTGATTATGCTCGGTCCAGTGGTTCATCCAAATTGTGA 1683 0.5365 MATQNQKHSLPNTTIDPNTGFCSSSRIFHSLRPNVPLPPPSQPLSLTDYALSLLPAAATATDKSAIIDATTGRHLSYSLFLRQVKSLASSIQSLTPLSKGHVALILTPTSVHVPVLYFSLLSLGVTVAPANPLSSPSELTHLVRLTKPAIAFVTSAVASNIPALKFGTVLTDSPLFLSMLDANVDSHSRAPGVEVSQSDSAAILFSSGTTGRVKGVFLTHRNFIAVTAGYYQLRTIQQDADEAEPHPVSLFTLPLFHVFGFFMLVRCISLGETLVLMQRFDFEGMLKAVERYKISMMPVSPPLVVALAKSELVNKYDLSSLRIIGCGGAPLGEHVADDFKAKFPNVEISQGYGLTESGGAAARTFGPEEFKRHGSVGRLSENMEAKIVDPVTGEALPPCQKGELWIRGPSIMKGYVGDEKASAETLDSGGWLKTGDLCYFDSEGFLYIVDRLKELIKYKAYQVPPAELEHILLTNPEIADAAVIPYPNEEAGQIPMAFVVRKPGSNISADQIMEFVAKQVSPYKKIRRVCFVNSIPKSPAGKILRRELVDYARSSGSSKL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01449 560 FunFam 4-coumarate--CoA ligase 2 454 555 - -
Viun9g01449 560 CDD 4CL 56 548 - -
Viun9g01449 560 Pfam AMP-binding enzyme C-terminal domain 467 542 IPR025110 -
Viun9g01449 560 Gene3D - 454 556 IPR045851 -
Viun9g01449 560 Gene3D - 27 453 IPR042099 -
Viun9g01449 560 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Viun9g01449 560 Pfam AMP-binding enzyme 57 458 IPR000873 -
Viun9g01449 560 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 550 - -
Viun9g01449 560 SUPERFAMILY Acetyl-CoA synthetase-like 54 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01449 Viun-Chr9 17081848 17085429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01449 15 560 Monolignol Biosynthesis Gene Families AT5G63380 61.939 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01449 K01904 - gmx:100777435 885.945