Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01448 ATGGCCACCCAAAACCAAAAACACTCTCTTCCAAACACCACCATCGACCCAAACACCGGTTTCTGTTCTTCTTCTAGAATCTTCCACAGCCTCCGTCCAAACGTCCCCCTCCCTCCGCCGTCTCAGCCGCTCTCCCTCACCGATTACGCCCTCTCCCTCCTCCCCGCCGCCGCCACCGCCACTGATAAATCCGCCATCATCGACGCCACAACCGGCCGCCACCTCTCCTACTCCCTCTTCCTCCGCCAAGTGAAATCCCTCGCCTCCTCCATCCAATCTCTCACCCCTCTCTCCAAAGGCCACGTGGCACTAATCCTCACTCCAACCTCCGTGCACGTTCCCGTACTATACTTCTCTCTCCTCTCGCTCGGGGTCACAGTCGCACCTGCCAACCCGCTCAGTTCCCCTTCCGAGTTGACTCACCTCGTCCGACTCACAAAACCCGCCATCGCCTTCGTCACCTCCGCCGTCGCCTCAAACATCCCCGCCCTCAAATTCGGCACTGTTCTCACCGACTCCCCGCTCTTCCTCTCCATGCTCGACGCCAACGTAGACTCACACTCACGCGCTCCCGGAGTCGAAGTGAGTCAGTCCGACTCCGCCGCAATTCTCTTCTCCTCCGGCACCACCGGGCGCGTGAAGGGCGTGTTGCTCACCCACCGGAACTTCATTGCAGTCACAGCCGGGTACTATCACCCGAGGACCATCCAGCAAGATGCCGACGAAACGGCAAAGCGCGCCGTGTCACTGTTCACGATGCCGCTGTTCCACGTGTTCGGGTTCTTCATGCTGGTCAGGTGCATCTCTTTGGGGGAGACGCTCGTTCTGATGCAGAGATTCGATTTCGAAGGTATGCTCAAAGCCGTGGAGAGGTATAAAATCTCAATGATGCCGGTGTCGCCGCCGCTCGTGGTGGCCCTCGTCAAGTCGGAGCTCGTGAACAAGTACGACCTGAGCTCGCTCCGGATTATAGGTTGCGGCGGCGCGCCGCTCGGCGAGCATGTCGCCGATGAATTCAAAGCCAAATTCCCCAACGTGGAAATTTTCCAGGGCTATGGTCTTACTGAAAGTGGAGGAGCAGCGGCTAGACCATTTGGTTCTAAGGAGTTTAAGCGCCATGGTTCTGTGGGTCGACTGTCAGAAAGCATGGAGGCCAAGATAGTGGACCCTGTAACTGGAGAGGCATTACCTCCTTGCCAAAAAGGGGAACTGTGGATTCGAGGTCCATCAATCATGAAAGGTTATGTAGGAGATGAGAAGGCGTCAGCTGAAACACTGGATTCAGGGGGATGGCTGAAGACAGGCGATCTTTGTTATTTTGACTCTGAGGGTTTCCTCTACATTGTAGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACACATACTTCTCACCAATCCTGAAATTGCTGATGCTGCAGTAATTCCGTACCCTAATGAAGAAGCAGGACAGATTCCTATGGCCTTTGTAGTAAGAAAACCTGGAAGCAACATTTCTGCAGATCAGATTATGGAGTTTGTGGCAAAGCAGGTTTCTCCTTACAAGAAGATACGGCGAGTATGTTTTGTCAATTCTATCCCAAAATCTCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTTGATTATGCTTTGTCCAGTGGTTCATCCAAATTGTGA 1683 0.5342 MATQNQKHSLPNTTIDPNTGFCSSSRIFHSLRPNVPLPPPSQPLSLTDYALSLLPAAATATDKSAIIDATTGRHLSYSLFLRQVKSLASSIQSLTPLSKGHVALILTPTSVHVPVLYFSLLSLGVTVAPANPLSSPSELTHLVRLTKPAIAFVTSAVASNIPALKFGTVLTDSPLFLSMLDANVDSHSRAPGVEVSQSDSAAILFSSGTTGRVKGVLLTHRNFIAVTAGYYHPRTIQQDADETAKRAVSLFTMPLFHVFGFFMLVRCISLGETLVLMQRFDFEGMLKAVERYKISMMPVSPPLVVALVKSELVNKYDLSSLRIIGCGGAPLGEHVADEFKAKFPNVEIFQGYGLTESGGAAARPFGSKEFKRHGSVGRLSESMEAKIVDPVTGEALPPCQKGELWIRGPSIMKGYVGDEKASAETLDSGGWLKTGDLCYFDSEGFLYIVDRLKELIKYKAYQVPPAELEHILLTNPEIADAAVIPYPNEEAGQIPMAFVVRKPGSNISADQIMEFVAKQVSPYKKIRRVCFVNSIPKSPAGKILRRELVDYALSSGSSKL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01448 560 Pfam AMP-binding enzyme 57 458 IPR000873 -
Viun9g01448 560 Pfam AMP-binding enzyme C-terminal domain 467 542 IPR025110 -
Viun9g01448 560 CDD 4CL 56 548 - -
Viun9g01448 560 Gene3D - 27 453 IPR042099 -
Viun9g01448 560 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 550 - -
Viun9g01448 560 FunFam 4-coumarate--CoA ligase 2 454 555 - -
Viun9g01448 560 ProSitePatterns Putative AMP-binding domain signature. 203 214 IPR020845 -
Viun9g01448 560 Gene3D - 454 554 IPR045851 -
Viun9g01448 560 SUPERFAMILY Acetyl-CoA synthetase-like 54 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01448 Viun-Chr9 16973845 16978766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01448 15 560 Monolignol Biosynthesis Gene Families AT5G63380 61.400 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01448 K01904 - gmx:100777435 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01448 9 16973845 16978766 Viun9g01448 9 16973845 16978766 ECH