LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun9g01422	ATGAGTCATGGTTTTGGAATCAGAATCAGAAATTCTAGAAAAGATGATGATAACCAAATGTGTTATGTAAAATTGGTGTGTTCTCGTGAGGGCAAGTATGTGTCATCCATACCACCAGAAATAAAGACTCAACCCACCCAAAGAAAGCAATGTCTTGAACGCATAACCGCTATTAGAAAGCAAGATAGATGGATGATAACCAGTATCGTTCATGATCACAATCATGAAGTCAGTCAAACCAAGTCAAGGCTAATACGAGCGAATAAGAAGCTTAGTATGCAAGTGAAAAGAACATTTGACTTAAATGACAAGGCAAGTGTGCGTCTTCACAAGAGCTTTCGCTCTTTGGTTTGTGAAGTAGGAGGATTTGATAACTTACAGTTTATGGAAAGAGACGCAAGAAACTACAATGATCAAAAGAGACGCGCATTGGGGAAGGAAAGTGATAGGCAAGCTTTGTTGAACCACTTTTCAGCTATGACAGACCTCAACAAAAATTTCATTTTTAAAATTGATATTGGTGGAGATAATCGAATATGCAATGTATTTTGGGCAGATGCAAGAAGTAAGGTTGCATGTGTAGATTTTGGGGATGTTGTTTCATTTGATACAACTTACTTAACAAATAAGTACGACATGCCTTTTGCACCATTTGTTGGTGTTAATCACCATAACTAA	678	0.3717	MSHGFGIRIRNSRKDDDNQMCYVKLVCSREGKYVSSIPPEIKTQPTQRKQCLERITAIRKQDRWMITSIVHDHNHEVSQTKSRLIRANKKLSMQVKRTFDLNDKASVRLHKSFRSLVCEVGGFDNLQFMERDARNYNDQKRRALGKESDRQALLNHFSAMTDLNKNFIFKIDIGGDNRICNVFWADARSKVACVDFGDVVSFDTTYLTNKYDMPFAPFVGVNHHN	225

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun9g01422	225	PANTHER	OS01G0519700 PROTEIN	3	204	-	-
	Viun9g01422	225	Pfam	FAR1 DNA-binding domain	3	77	IPR004330	-
	Viun9g01422	225	Coils	Coil	126	146	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun9g01422	Viun-Chr9	15672175	15672852	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Viun9g01422		FAR1	8.1e-10	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun9g01422	-		-	vun:114163491	464.536