Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01399 ATGGATGCCCCAATCCTCCTCTTGCCCCAACCCGATCTCTATTTACAAACTCCCGCTGGCAACCGCATTCCAGCGCACGCTACCATTCTGGCTTCCGCATCCCCGGTTCTGCAAAACGTGATAAAGTCCTCCAACCGAATCGTCAAAATCCACGGCGTTCCAGACGCTGCCGTCACGGCTTTCGTAGCGTTCCTCTACTCCGCCAGGTGCACGGAGGAGGATATGGATAAGTACGCAATGCACCTTCTGGCACTGTCGCACGTGTACATGGTGAAGCAGCTGAAACAGCGGTGCATCAAGGGACTGGGCGACCGCGTCGGTACGGAGAACGTAGTGGACGTGTTGCAACTGGCGCGGCTCTGCGACGCGCCGGATCTCTACCTCAAGTGTGCCAGGCACCTCACGAACCGTTTCAAAGCGGTGAAGGAAACCGAGGGATGGAGATTCTTGCAGAACAACGACCCCTGCCTCGAGCTTGAGATTCTCTGTTTCATGGAAGAACATGAAAAGAGAAAGAGGAAGGCGAGGAAGAGGAGGGAGGATGGAATGCTGTACACGGAATTGAGCGAAGCGATGGTATGTCTGGAGCACATATGTACGGAGGGATGCACGGAGGTTTGGCCGTATGATGTGGAGGTCAGGCGAGAGAGAGAACCGTGTTCAAAGTTTGGCACGTGTCAGGGTCTGCAAAATTTGATTCGACACTTTGCCACCTGCGAGAGAGTTAAGGGGCGGTGTTTACGGTGTAAGCGCATGTGGCAACTCTTCAGACTCCATTCCTCCATTTGCCTGCGACACGATGCCTGCAAGGTTCCTCTGTGCAGTCAAATCAGATTAAAAATGGAGCAAGAGAAGAAGAAAGGTGACGGAAGGTGGGAAGTACTAGTGAGGAAGGTGGCCTCGGCCAAAGCCATGTCTTCATTGGCACTGCCAAAGAGGAAGCGGGTTGAGGAAATTAGACGAGAGTTACCATAA 975 0.5344 MDAPILLLPQPDLYLQTPAGNRIPAHATILASASPVLQNVIKSSNRIVKIHGVPDAAVTAFVAFLYSARCTEEDMDKYAMHLLALSHVYMVKQLKQRCIKGLGDRVGTENVVDVLQLARLCDAPDLYLKCARHLTNRFKAVKETEGWRFLQNNDPCLELEILCFMEEHEKRKRKARKRREDGMLYTELSEAMVCLEHICTEGCTEVWPYDVEVRREREPCSKFGTCQGLQNLIRHFATCERVKGRCLRCKRMWQLFRLHSSICLRHDACKVPLCSQIRLKMEQEKKKGDGRWEVLVRKVASAKAMSSLALPKRKRVEEIRRELP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01399 324 SMART TAZ_2 182 275 IPR000197 -
Viun9g01399 324 CDD BACK 109 150 - -
Viun9g01399 324 Pfam TAZ zinc finger 189 274 IPR000197 -
Viun9g01399 324 Gene3D TAZ domain 177 310 IPR035898 -
Viun9g01399 324 ProSiteProfiles BTB domain profile. 11 74 IPR000210 GO:0005515
Viun9g01399 324 Gene3D - 106 176 - -
Viun9g01399 324 Gene3D Potassium Channel Kv1.1; Chain A 10 101 IPR011333 -
Viun9g01399 324 FunFam BTB/POZ and TAZ domain-containing protein 2 107 177 - -
Viun9g01399 324 Pfam BTB/POZ domain 11 100 IPR000210 GO:0005515
Viun9g01399 324 SUPERFAMILY TAZ domain 184 283 IPR035898 -
Viun9g01399 324 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 10 315 IPR044513 -
Viun9g01399 324 SUPERFAMILY POZ domain 12 103 IPR011333 -
Viun9g01399 324 FunFam BTB/POZ and TAZ domain-containing protein 2 179 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01399 Viun-Chr9 14785323 14788913 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Viun9g01399 BTB 4.4e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01399 - - pvu:PHAVU_009G170600g 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01399 9 14785323 14788913 Viun9g01399 9 14785323 14788913 ECH
Viun3g04333 3 51153060 51156346 Viun9g01399 9 14785323 14788913 PCT