Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01398 ATGGATAAGTACGCAATGCACCTTCTGGCACTGTCGCACGTGTACATGGTGAAGCAGCTGAAACAGCGGTGCATCAAGGGACTGGGCGACCGCGTCGGTACGGAGAACGTAGTGGACGTGTTGCAACTGGCGCGGCTCTGCGACGCGCCGGATCTCTACCTCAAGTGTGCCAGGCACCTCACGAACCGTTTCAAAGCGGTGAAGGAAACCGAGGGATGGAGATTCTTGCAGAACAACGACCCCTGCCTCGAGCTTGAGATTCTCTGTTTCATGGAAGAACATGAAAAGAGAAAGAGGAAGGCGAGGAAGAGGAGGGAGGATGGAATGCTGTACACGGAATTGAGCGAAGCGATGGTATGTCTGGAGCACATATGTACGGAGGGATGCACGGAGGTTTGGCCGTATGATGTGGAGGTCAGGCGAGAGAGAGAACCGTGTTCAAAGTTTGGCACGTGTCAGGGTCTGCAAAATTTGATTCGACACTTTGCCACCTGCGAGAGAGTTAAGGGGCGGTGTTTACGGTGTAAGCGCATGTGGCAACTCTTCAGACTCCATTCCTCCATTTGCCTGCGACACGATGCCTGCAAGGTTCCTCTGTGCAGTCAAATCAGATTAAAAATGGAGCAAGAGAAGAAGAAAGGTGACGGAAGGTGGGAAGTACTAGTGAGGAAGGTGGCCTCGGCCAAAGCCATGTCTTCATTGGCACTGCCAAAGAGGAAGCGGGTTGAGGAAATTAGACGAGAGTTACCATAA 753 0.5246 MDKYAMHLLALSHVYMVKQLKQRCIKGLGDRVGTENVVDVLQLARLCDAPDLYLKCARHLTNRFKAVKETEGWRFLQNNDPCLELEILCFMEEHEKRKRKARKRREDGMLYTELSEAMVCLEHICTEGCTEVWPYDVEVRREREPCSKFGTCQGLQNLIRHFATCERVKGRCLRCKRMWQLFRLHSSICLRHDACKVPLCSQIRLKMEQEKKKGDGRWEVLVRKVASAKAMSSLALPKRKRVEEIRRELP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01398 250 Gene3D - 32 104 - -
Viun9g01398 250 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 1 241 IPR044513 -
Viun9g01398 250 FunFam BTB/POZ and TAZ domain-containing protein 2 102 230 - -
Viun9g01398 250 SMART TAZ_2 108 201 IPR000197 -
Viun9g01398 250 FunFam BTB/POZ and TAZ domain-containing protein 2 33 103 - -
Viun9g01398 250 Gene3D TAZ domain 105 228 IPR035898 -
Viun9g01398 250 CDD BACK 35 76 - -
Viun9g01398 250 Pfam TAZ zinc finger 115 200 IPR000197 -
Viun9g01398 250 SUPERFAMILY TAZ domain 110 209 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01398 Viun-Chr9 14785323 14788988 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Viun9g01398 zf-TAZ 3.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01398 - - pvu:PHAVU_009G170600g 441.81