Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01361 ATGCCGCCGGATTCCTCCGAGCAGGACCTCGACGATCCTGACATGGAATTCGTCGAGGTTGATCCCTCTGGTCGTTATGGTCGGTACAAGGAAGTTTTAGGGAAAGGGGCTTTCAAGAAAGTATATCGTGCGTTTGATGAATTGGAAGGTATTGAAGTGGCTTGGAATCAGATTAAGCTGGCGGATGTGTTGCGTAACTCTGAAGATTTCGAGCGACTTTATTCGGAGGTTCATTTACTCAAGACTCTGAAGCATAAGAATATAATTAAGTTTTATAACTCATGGATTGACTCCAAGAGCGAGAACATCAACTTCATCACTGAAATTTTCACCTCAGGAACGTTGCGCCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCTGTGAAGAAATGGTCTAAGCAGATTCTGGAAGGCCTTTACTATCTTCACAGTAATAATCCTCCGATCATTCATCGTGACCTGAAGTGTGATAACATTTTCGTCAATGGGAATCAAGGGGAGGTAAAAATTGGTGATTTAGGATTGGCGGCTATCCTCCAGCAGGCCAATTCAGCTCACAGTGTCATAGGTAACATTTCTTTTGAAATCGTTATACTACTTTTTTTTTTTTTTTTCTTTTGTGGACTGTTGCGGGAATCTTGTGTAATTCTCATTGTGAGCCTAGGAACTCCGGAGTTCATGGCCCCAGAACTTTACGAAGAGGAATACAACGAGCTTGTAGACATCTATGCTTTTGGTATGTGCTTGTTAGAGTTGGTAACAGTTGAGTACCCGTATGTTGAATGTGCCAATGCCGCTCAAATATACAAGAAAGTGACATCTGGAATAAAGCCAGCATCATTGGCAAAAGTGACAGATCCTGATGTTAAAGCATTTATTGAAAAGTGTATTGCTAATGTCTCTGAACGGTTGTCTGCGAAGGACCTCTTGTTGGATCCCTTCCTTCAGTCAGATTATGATAATGAAAGTGTAGCCCGATCTTCAAAAGCTCAAACCCATCATTTAGCAAATATTTCTCATAATCAAGCTATTGTTGTGGATACTTCTACTGACGCAAGTAGGGAATTCACGGTGGAAGGTCAGAGGAGAGATAATAATACAATATTTTTAAAATTGAGAATTGCAGATTCCTCAGGTCATATTCGCAATATCCACTTTCCTTTTGATATCGAAGCAGACACTTCAACCTCTGTTGCCAGTGAAATGGTTGAGGAGTTGGAACTAACTGATCAAGATGTTACAACTATTGCTAGGATGATTGACTCTGAAATTCGGTTTCACATTCCTAGTTGGAACGTCAGTGAAATTCCTGTTGACTGTTATAGTCAAGATTCAGACTATACCTCTGAAAGTAGGCCAGAGGCCTCTCCTATGAAACACGATTCCGTTAGTTCCCCTGGCAGTCTTGCATTAGAAATATTACCTTCAGGTCGAAAGTTCTGGTCAGACTCACCAAGGGGAGTTGGTGGAAACTCTCCATTTCGTGCTGGTACTTCAAAATTTTTTTCTCCTGCAGATGCAAACGCTGACGAAGGCAGCCTGGCCGCGAATGGTGATATTTCAGCTGATGATCGTGTTGGTGATTTTTGTGAAGAGATTGTTGATTCCCCTTCCAGTGAGAAAAGTATCAAATCAGGAGCAACCAGTGAAAAATCTGCTGTGAACGAAATATCTGGAAGCGTGAAAGATTCGGAAGCAGAATACATCAATCTCATAGCAACAAAACTGGAGAGCTTGTTGGTTAAACAAAGAGAGGAGTTAGATGAACTAAAGAGGAAGCACGAATTAGCTGTTTCAGATCTTTTGAAGGAACTTTCTCCAGAAATTAGCCAGAAGGTTCTAAATATATGCAACCTACAGATGCATGGCGGTGAAGTGCAGGGAGAAGCTCGCCCTTCATTCATCTAA 1914 0.4148 MPPDSSEQDLDDPDMEFVEVDPSGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQIKLADVLRNSEDFERLYSEVHLLKTLKHKNIIKFYNSWIDSKSENINFITEIFTSGTLRQYRKKHKHVDLRAVKKWSKQILEGLYYLHSNNPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGNISFEIVILLFFFFFFCGLLRESCVILIVSLGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVTSGIKPASLAKVTDPDVKAFIEKCIANVSERLSAKDLLLDPFLQSDYDNESVARSSKAQTHHLANISHNQAIVVDTSTDASREFTVEGQRRDNNTIFLKLRIADSSGHIRNIHFPFDIEADTSTSVASEMVEELELTDQDVTTIARMIDSEIRFHIPSWNVSEIPVDCYSQDSDYTSESRPEASPMKHDSVSSPGSLALEILPSGRKFWSDSPRGVGGNSPFRAGTSKFFSPADANADEGSLAANGDISADDRVGDFCEEIVDSPSSEKSIKSGATSEKSAVNEISGSVKDSEAEYINLIATKLESLLVKQREELDELKRKHELAVSDLLKELSPEISQKVLNICNLQMHGGEVQGEARPSFI 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01361 637 SUPERFAMILY Protein kinase-like (PK-like) 29 368 IPR011009 -
Viun9g01361 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Viun9g01361 637 ProSiteProfiles Protein kinase domain profile. 27 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01361 637 Gene3D - 368 449 - -
Viun9g01361 637 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 537 - -
Viun9g01361 637 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 372 426 IPR024678 GO:0004674|GO:0005524
Viun9g01361 637 FunFam Probable serine/threonine-protein kinase WNK3 368 459 - -
Viun9g01361 637 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Viun9g01361 637 MobiDBLite consensus disorder prediction 445 469 - -
Viun9g01361 637 SMART serkin_6 27 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01361 637 CDD STKc_WNK 25 317 - -
Viun9g01361 637 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Viun9g01361 637 Pfam Protein kinase domain 30 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun9g01361 637 Coils Coil 575 606 - -
Viun9g01361 637 Gene3D Transferase(Phosphotransferase) domain 1 110 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01361 Viun-Chr9 13828472 13832567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01361 17 433 MAP Kinase Kinase Kinase AT3G22420 55.227 6.40e-167 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Viun9g01361 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01361 K08867 - gmx:100301899 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01361 9 13828472 13832567 Viun9g01361 9 13828472 13832567 ECH