Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01340 ATGGAATCCAAACCCGATCAAAATATCAAGCTCCTCTGTAGTTACGGCGGCAAAATTCGCCCACGCACCACCGACGGCGAACTGCGTTACGTCGGAGGCCACACCAGAGTACTCACCGTCAACCGTTCGATCTCCTTTTCAGAATTGATGGTCAAACTTACTGAATTTTGCGGTTCGTCCGTAATCTTGAAGTGTCAATTACCCAAGGAAAACTTGGAGACCCTGATTTCCATCACCAACGACGAAGATCTCGCTAACATAATCGAAGAATACGATCGTGCCTCGTTGAAACTGGTGCATCCAATGAAGATCAGAGCCGTTCTCTTGCCGCCGAGGTCGGTGAAGAAGGTTTCGTCCACTTCGACGTTGTCCTCGGCATCGTCCAGCGCTAGTCCCTCTCCGTCCAGATCGCCTCACACTTCCGCCGAATCCCTGCCATACGCGGCGGCGTACCGCCACGGATGCAATCACCGGACTCCGCTGTTGCCGGCTGCGTACGCTATCGGCGTGCGTAACGGCTCTGCGAAGGCCTGTTGCTACACGCAGTTCGGTGGAAATCATAGATTTTGGCGTCGTGGACCTCACCGCTATAATTACTGCCACTGA 606 0.5347 MESKPDQNIKLLCSYGGKIRPRTTDGELRYVGGHTRVLTVNRSISFSELMVKLTEFCGSSVILKCQLPKENLETLISITNDEDLANIIEEYDRASLKLVHPMKIRAVLLPPRSVKKVSSTSTLSSASSSASPSPSRSPHTSAESLPYAAAYRHGCNHRTPLLPAAYAIGVRNGSAKACCYTQFGGNHRFWRRGPHRYNYCH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01340 201 SUPERFAMILY CAD & PB1 domains 25 115 - -
Viun9g01340 201 SMART PB1_new 23 102 IPR000270 GO:0005515
Viun9g01340 201 MobiDBLite consensus disorder prediction 120 141 - -
Viun9g01340 201 Gene3D - 29 108 - -
Viun9g01340 201 Pfam PB1 domain 25 98 IPR000270 GO:0005515
Viun9g01340 201 CDD PB1_UP2 12 108 - -
Viun9g01340 201 PANTHER OS05G0427100 PROTEIN-RELATED 4 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01340 Viun-Chr9 13380481 13382443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun9g01340 9 93 MAP Kinase Kinase Kinase AT5G57610 50.588 1.05e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01340 - - vra:106761207 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g01340 9 13380481 13382443 Viun9g01340 9 13380481 13382443 ECH
Viun3g04373 3 51464279 51465632 Viun9g01340 9 13380481 13382443 PCT